Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC24.08■■□□□ 1.45
COL22A1Q8NFW1 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.44
COL22A1Q8NFW1 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC24.08■■□□□ 1.44
COL22A1Q8NFW1 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.44
COL22A1Q8NFW1 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
COL22A1Q8NFW1 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC24.07■■□□□ 1.44
COL22A1Q8NFW1 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC24.07■■□□□ 1.44
COL22A1Q8NFW1 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
COL22A1Q8NFW1 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC24.07■■□□□ 1.44
COL22A1Q8NFW1 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
COL22A1Q8NFW1 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC24.07■■□□□ 1.44
COL22A1Q8NFW1 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC24.07■■□□□ 1.44
COL22A1Q8NFW1 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC24.07■■□□□ 1.44
COL22A1Q8NFW1 AQP6-203ENST00000551733 849 ntTSL 3 BASIC24.07■■□□□ 1.44
COL22A1Q8NFW1 AC087641.1-201ENST00000557561 1021 ntBASIC24.07■■□□□ 1.44
COL22A1Q8NFW1 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC24.07■■□□□ 1.44
COL22A1Q8NFW1 AC073592.5-201ENST00000624854 528 ntBASIC24.07■■□□□ 1.44
COL22A1Q8NFW1 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
COL22A1Q8NFW1 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
COL22A1Q8NFW1 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
COL22A1Q8NFW1 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
COL22A1Q8NFW1 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
COL22A1Q8NFW1 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
COL22A1Q8NFW1 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
COL22A1Q8NFW1 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC24.06■■□□□ 1.44
COL22A1Q8NFW1 PMS2P4-201ENST00000412466 1052 ntBASIC24.06■■□□□ 1.44
COL22A1Q8NFW1 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
COL22A1Q8NFW1 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
COL22A1Q8NFW1 AC068137.2-201ENST00000605408 478 ntBASIC24.06■■□□□ 1.44
COL22A1Q8NFW1 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC24.06■■□□□ 1.44
COL22A1Q8NFW1 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC24.06■■□□□ 1.44
COL22A1Q8NFW1 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
COL22A1Q8NFW1 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
COL22A1Q8NFW1 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
COL22A1Q8NFW1 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC24.06■■□□□ 1.44
COL22A1Q8NFW1 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
COL22A1Q8NFW1 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
COL22A1Q8NFW1 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
COL22A1Q8NFW1 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
COL22A1Q8NFW1 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
COL22A1Q8NFW1 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
COL22A1Q8NFW1 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
COL22A1Q8NFW1 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC24.06■■□□□ 1.44
COL22A1Q8NFW1 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC24.06■■□□□ 1.44
COL22A1Q8NFW1 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC24.06■■□□□ 1.44
COL22A1Q8NFW1 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC24.05■■□□□ 1.44
COL22A1Q8NFW1 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC24.05■■□□□ 1.44
COL22A1Q8NFW1 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
COL22A1Q8NFW1 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC24.05■■□□□ 1.44
COL22A1Q8NFW1 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
COL22A1Q8NFW1 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC24.05■■□□□ 1.44
COL22A1Q8NFW1 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
COL22A1Q8NFW1 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
COL22A1Q8NFW1 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC24.05■■□□□ 1.44
COL22A1Q8NFW1 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
COL22A1Q8NFW1 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC24.05■■□□□ 1.44
COL22A1Q8NFW1 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC24.05■■□□□ 1.44
COL22A1Q8NFW1 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
COL22A1Q8NFW1 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
COL22A1Q8NFW1 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC24.05■■□□□ 1.44
COL22A1Q8NFW1 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC24.05■■□□□ 1.44
COL22A1Q8NFW1 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
COL22A1Q8NFW1 BAD-202ENST00000394531 631 ntTSL 3 BASIC24.04■■□□□ 1.44
COL22A1Q8NFW1 AC007274.1-201ENST00000439805 662 ntBASIC24.04■■□□□ 1.44
COL22A1Q8NFW1 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC24.04■■□□□ 1.44
COL22A1Q8NFW1 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC24.04■■□□□ 1.44
COL22A1Q8NFW1 AC004835.2-201ENST00000603762 682 ntBASIC24.04■■□□□ 1.44
COL22A1Q8NFW1 AQP6-205ENST00000618286 829 ntTSL 5 BASIC24.04■■□□□ 1.44
COL22A1Q8NFW1 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
COL22A1Q8NFW1 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC24.04■■□□□ 1.44
COL22A1Q8NFW1 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
COL22A1Q8NFW1 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC24.04■■□□□ 1.44
COL22A1Q8NFW1 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC24.04■■□□□ 1.44
COL22A1Q8NFW1 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC24.04■■□□□ 1.44
COL22A1Q8NFW1 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
COL22A1Q8NFW1 SNAI3-AS1-205ENST00000568633 2096 ntBASIC24.03■■□□□ 1.44
COL22A1Q8NFW1 AC099343.3-201ENST00000605834 2503 ntBASIC24.03■■□□□ 1.44
COL22A1Q8NFW1 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
COL22A1Q8NFW1 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC24.03■■□□□ 1.44
COL22A1Q8NFW1 AC005034.1-201ENST00000426657 489 ntBASIC24.03■■□□□ 1.44
COL22A1Q8NFW1 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC24.03■■□□□ 1.44
COL22A1Q8NFW1 SLBP-205ENST00000488267 987 ntTSL 2 BASIC24.03■■□□□ 1.44
COL22A1Q8NFW1 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC24.03■■□□□ 1.44
COL22A1Q8NFW1 SMN2-210ENST00000511812 867 ntTSL 2 BASIC24.03■■□□□ 1.44
COL22A1Q8NFW1 AC069262.1-201ENST00000539058 672 ntBASIC24.03■■□□□ 1.44
COL22A1Q8NFW1 YTHDF3-AS1-201ENST00000603538 718 ntBASIC24.03■■□□□ 1.44
COL22A1Q8NFW1 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
COL22A1Q8NFW1 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC24.03■■□□□ 1.44
COL22A1Q8NFW1 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
COL22A1Q8NFW1 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
COL22A1Q8NFW1 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
COL22A1Q8NFW1 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC24.03■■□□□ 1.44
COL22A1Q8NFW1 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
COL22A1Q8NFW1 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC24.03■■□□□ 1.44
COL22A1Q8NFW1 AL020989.1-201ENST00000422979 469 ntBASIC24.02■■□□□ 1.44
COL22A1Q8NFW1 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
COL22A1Q8NFW1 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC24.02■■□□□ 1.44
COL22A1Q8NFW1 CYB561-217ENST00000582997 877 ntTSL 5 BASIC24.02■■□□□ 1.44
COL22A1Q8NFW1 AC105339.1-204ENST00000636249 355 ntBASIC24.02■■□□□ 1.44
COL22A1Q8NFW1 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms