Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
BEST4Q8NFU0 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BEST4Q8NFU0 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
BEST4Q8NFU0 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.71■□□□□ 0.11
BEST4Q8NFU0 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.71■□□□□ 0.11
BEST4Q8NFU0 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.71■□□□□ 0.11
BEST4Q8NFU0 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.71■□□□□ 0.11
BEST4Q8NFU0 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
BEST4Q8NFU0 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC15.71■□□□□ 0.11
BEST4Q8NFU0 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BEST4Q8NFU0 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BEST4Q8NFU0 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BEST4Q8NFU0 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BEST4Q8NFU0 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
BEST4Q8NFU0 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.71■□□□□ 0.11
BEST4Q8NFU0 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
BEST4Q8NFU0 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC15.71■□□□□ 0.11
BEST4Q8NFU0 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
BEST4Q8NFU0 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC15.71■□□□□ 0.11
BEST4Q8NFU0 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
BEST4Q8NFU0 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
BEST4Q8NFU0 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BEST4Q8NFU0 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
BEST4Q8NFU0 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BEST4Q8NFU0 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BEST4Q8NFU0 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BEST4Q8NFU0 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BEST4Q8NFU0 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BEST4Q8NFU0 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
BEST4Q8NFU0 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.71■□□□□ 0.11
BEST4Q8NFU0 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BEST4Q8NFU0 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC15.71■□□□□ 0.1
BEST4Q8NFU0 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC15.71■□□□□ 0.1
BEST4Q8NFU0 KRT8P32-201ENST00000512863 1461 ntBASIC15.71■□□□□ 0.1
BEST4Q8NFU0 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
BEST4Q8NFU0 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
BEST4Q8NFU0 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
BEST4Q8NFU0 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BEST4Q8NFU0 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BEST4Q8NFU0 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.7■□□□□ 0.1
BEST4Q8NFU0 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
BEST4Q8NFU0 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
BEST4Q8NFU0 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.7■□□□□ 0.1
BEST4Q8NFU0 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.7■□□□□ 0.1
BEST4Q8NFU0 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
BEST4Q8NFU0 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC15.7■□□□□ 0.1
BEST4Q8NFU0 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.7■□□□□ 0.1
BEST4Q8NFU0 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.7■□□□□ 0.1
BEST4Q8NFU0 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
BEST4Q8NFU0 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
BEST4Q8NFU0 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
BEST4Q8NFU0 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
BEST4Q8NFU0 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC15.7■□□□□ 0.1
BEST4Q8NFU0 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
BEST4Q8NFU0 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
BEST4Q8NFU0 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
BEST4Q8NFU0 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.7■□□□□ 0.1
BEST4Q8NFU0 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
BEST4Q8NFU0 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
BEST4Q8NFU0 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC15.7■□□□□ 0.1
BEST4Q8NFU0 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
BEST4Q8NFU0 VPS53-216ENST00000574029 585 ntTSL 4 BASIC15.7■□□□□ 0.1
BEST4Q8NFU0 IKBKGP1-201ENST00000612193 1073 ntBASIC15.7■□□□□ 0.1
BEST4Q8NFU0 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC15.7■□□□□ 0.1
BEST4Q8NFU0 AC008741.2-201ENST00000612792 3115 ntBASIC15.7■□□□□ 0.1
BEST4Q8NFU0 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.7■□□□□ 0.1
BEST4Q8NFU0 AL162727.3-201ENST00000635661 2787 ntBASIC15.7■□□□□ 0.1
BEST4Q8NFU0 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BEST4Q8NFU0 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
BEST4Q8NFU0 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
BEST4Q8NFU0 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
BEST4Q8NFU0 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
BEST4Q8NFU0 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.7■□□□□ 0.1
BEST4Q8NFU0 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BEST4Q8NFU0 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
BEST4Q8NFU0 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BEST4Q8NFU0 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BEST4Q8NFU0 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BEST4Q8NFU0 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.7■□□□□ 0.1
BEST4Q8NFU0 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BEST4Q8NFU0 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.7■□□□□ 0.1
BEST4Q8NFU0 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BEST4Q8NFU0 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC15.69■□□□□ 0.1
BEST4Q8NFU0 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BEST4Q8NFU0 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
BEST4Q8NFU0 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC15.69■□□□□ 0.1
BEST4Q8NFU0 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.69■□□□□ 0.1
BEST4Q8NFU0 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BEST4Q8NFU0 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC15.69■□□□□ 0.1
BEST4Q8NFU0 GUSBP6-202ENST00000438529 1198 ntBASIC15.69■□□□□ 0.1
BEST4Q8NFU0 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BEST4Q8NFU0 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC15.69■□□□□ 0.1
BEST4Q8NFU0 TSPY6P-201ENST00000448518 926 ntBASIC15.69■□□□□ 0.1
BEST4Q8NFU0 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC15.69■□□□□ 0.1
BEST4Q8NFU0 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BEST4Q8NFU0 AL137784.2-201ENST00000607332 1000 ntBASIC15.69■□□□□ 0.1
BEST4Q8NFU0 AC004264.1-201ENST00000608354 794 ntBASIC15.69■□□□□ 0.1
BEST4Q8NFU0 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC15.69■□□□□ 0.1
BEST4Q8NFU0 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC15.69■□□□□ 0.1
BEST4Q8NFU0 NBPF21P-201ENST00000425093 1451 ntBASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms