Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
ZNF248Q8NDW4 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF248Q8NDW4 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF248Q8NDW4 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF248Q8NDW4 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF248Q8NDW4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
ZNF248Q8NDW4 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.34■□□□□ 0.37
ZNF248Q8NDW4 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF248Q8NDW4 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF248Q8NDW4 AC096582.2-201ENST00000510860 516 ntBASIC17.34■□□□□ 0.37
ZNF248Q8NDW4 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF248Q8NDW4 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.34■□□□□ 0.37
ZNF248Q8NDW4 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF248Q8NDW4 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.34■□□□□ 0.37
ZNF248Q8NDW4 AC114341.1-201ENST00000618070 349 ntBASIC17.34■□□□□ 0.37
ZNF248Q8NDW4 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
ZNF248Q8NDW4 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.34■□□□□ 0.37
ZNF248Q8NDW4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF248Q8NDW4 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.34■□□□□ 0.37
ZNF248Q8NDW4 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
ZNF248Q8NDW4 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZNF248Q8NDW4 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZNF248Q8NDW4 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZNF248Q8NDW4 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
ZNF248Q8NDW4 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.33■□□□□ 0.37
ZNF248Q8NDW4 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.33■□□□□ 0.37
ZNF248Q8NDW4 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZNF248Q8NDW4 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZNF248Q8NDW4 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
ZNF248Q8NDW4 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZNF248Q8NDW4 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
ZNF248Q8NDW4 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF248Q8NDW4 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF248Q8NDW4 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF248Q8NDW4 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF248Q8NDW4 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF248Q8NDW4 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF248Q8NDW4 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF248Q8NDW4 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF248Q8NDW4 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.33■□□□□ 0.36
ZNF248Q8NDW4 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF248Q8NDW4 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
ZNF248Q8NDW4 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.33■□□□□ 0.36
ZNF248Q8NDW4 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF248Q8NDW4 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.33■□□□□ 0.36
ZNF248Q8NDW4 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.33■□□□□ 0.36
ZNF248Q8NDW4 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.33■□□□□ 0.36
ZNF248Q8NDW4 MIR7706-201ENST00000613747 67 ntBASIC17.33■□□□□ 0.36
ZNF248Q8NDW4 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF248Q8NDW4 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF248Q8NDW4 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF248Q8NDW4 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF248Q8NDW4 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.33■□□□□ 0.36
ZNF248Q8NDW4 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF248Q8NDW4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.33■□□□□ 0.36
ZNF248Q8NDW4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.33■□□□□ 0.36
ZNF248Q8NDW4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.33■□□□□ 0.36
ZNF248Q8NDW4 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF248Q8NDW4 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF248Q8NDW4 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.32■□□□□ 0.36
ZNF248Q8NDW4 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF248Q8NDW4 AC087289.5-201ENST00000586076 3175 ntBASIC17.32■□□□□ 0.36
ZNF248Q8NDW4 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF248Q8NDW4 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF248Q8NDW4 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.32■□□□□ 0.36
ZNF248Q8NDW4 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF248Q8NDW4 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF248Q8NDW4 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.32■□□□□ 0.36
ZNF248Q8NDW4 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF248Q8NDW4 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.32■□□□□ 0.36
ZNF248Q8NDW4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF248Q8NDW4 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF248Q8NDW4 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
ZNF248Q8NDW4 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF248Q8NDW4 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF248Q8NDW4 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
ZNF248Q8NDW4 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.32■□□□□ 0.36
ZNF248Q8NDW4 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
ZNF248Q8NDW4 AC132008.2-207ENST00000454517 770 ntBASIC17.32■□□□□ 0.36
ZNF248Q8NDW4 SCARNA2-201ENST00000458748 420 ntBASIC17.32■□□□□ 0.36
ZNF248Q8NDW4 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF248Q8NDW4 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.32■□□□□ 0.36
ZNF248Q8NDW4 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.32■□□□□ 0.36
ZNF248Q8NDW4 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.32■□□□□ 0.36
ZNF248Q8NDW4 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF248Q8NDW4 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
ZNF248Q8NDW4 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
ZNF248Q8NDW4 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF248Q8NDW4 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
ZNF248Q8NDW4 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF248Q8NDW4 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF248Q8NDW4 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF248Q8NDW4 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF248Q8NDW4 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
ZNF248Q8NDW4 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.32■□□□□ 0.36
ZNF248Q8NDW4 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
ZNF248Q8NDW4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.32■□□□□ 0.36
ZNF248Q8NDW4 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF248Q8NDW4 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.32■□□□□ 0.36
ZNF248Q8NDW4 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms