Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC15.13■□□□□ 0.01
C11orf42Q8N5U0 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
C11orf42Q8N5U0 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
C11orf42Q8N5U0 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
C11orf42Q8N5U0 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC15.13■□□□□ 0.01
C11orf42Q8N5U0 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
C11orf42Q8N5U0 SDHAP2-201ENST00000455183 2001 ntBASIC15.13■□□□□ 0.01
C11orf42Q8N5U0 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
C11orf42Q8N5U0 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC15.13■□□□□ 0.01
C11orf42Q8N5U0 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
C11orf42Q8N5U0 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
C11orf42Q8N5U0 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC15.13■□□□□ 0.01
C11orf42Q8N5U0 NME3-204ENST00000563498 920 ntTSL 2 BASIC15.13■□□□□ 0.01
C11orf42Q8N5U0 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
C11orf42Q8N5U0 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.13■□□□□ 0.01
C11orf42Q8N5U0 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.13■□□□□ 0.01
C11orf42Q8N5U0 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
C11orf42Q8N5U0 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
C11orf42Q8N5U0 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
C11orf42Q8N5U0 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.13■□□□□ 0.01
C11orf42Q8N5U0 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
C11orf42Q8N5U0 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC15.13■□□□□ 0.01
C11orf42Q8N5U0 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
C11orf42Q8N5U0 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
C11orf42Q8N5U0 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC15.13■□□□□ 0.01
C11orf42Q8N5U0 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC15.13■□□□□ 0.01
C11orf42Q8N5U0 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
C11orf42Q8N5U0 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
C11orf42Q8N5U0 FER1L4-210ENST00000615531 5998 ntBASIC15.12■□□□□ 0.01
C11orf42Q8N5U0 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
C11orf42Q8N5U0 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
C11orf42Q8N5U0 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.12■□□□□ 0.01
C11orf42Q8N5U0 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC15.12■□□□□ 0.01
C11orf42Q8N5U0 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC15.12■□□□□ 0.01
C11orf42Q8N5U0 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
C11orf42Q8N5U0 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC15.12■□□□□ 0.01
C11orf42Q8N5U0 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
C11orf42Q8N5U0 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.12■□□□□ 0.01
C11orf42Q8N5U0 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
C11orf42Q8N5U0 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.12■□□□□ 0.01
C11orf42Q8N5U0 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
C11orf42Q8N5U0 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.12■□□□□ 0.01
C11orf42Q8N5U0 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC15.12■□□□□ 0.01
C11orf42Q8N5U0 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.12■□□□□ 0.01
C11orf42Q8N5U0 AC079602.3-201ENST00000623931 403 ntBASIC15.12■□□□□ 0.01
C11orf42Q8N5U0 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
C11orf42Q8N5U0 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
C11orf42Q8N5U0 AL139384.1-201ENST00000612143 3047 ntBASIC15.12■□□□□ 0.01
C11orf42Q8N5U0 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
C11orf42Q8N5U0 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
C11orf42Q8N5U0 AC099343.3-201ENST00000605834 2503 ntBASIC15.12■□□□□ 0.01
C11orf42Q8N5U0 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
C11orf42Q8N5U0 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
C11orf42Q8N5U0 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC15.12■□□□□ 0.01
C11orf42Q8N5U0 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
C11orf42Q8N5U0 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
C11orf42Q8N5U0 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC15.12■□□□□ 0.01
C11orf42Q8N5U0 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.11■□□□□ 0.01
C11orf42Q8N5U0 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC15.11■□□□□ 0.01
C11orf42Q8N5U0 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
C11orf42Q8N5U0 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C11orf42Q8N5U0 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
C11orf42Q8N5U0 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC15.11■□□□□ 0.01
C11orf42Q8N5U0 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
C11orf42Q8N5U0 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
C11orf42Q8N5U0 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C11orf42Q8N5U0 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C11orf42Q8N5U0 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
C11orf42Q8N5U0 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
C11orf42Q8N5U0 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C11orf42Q8N5U0 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
C11orf42Q8N5U0 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
C11orf42Q8N5U0 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C11orf42Q8N5U0 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
C11orf42Q8N5U0 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC15.11■□□□□ 0.01
C11orf42Q8N5U0 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C11orf42Q8N5U0 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
C11orf42Q8N5U0 AL359075.1-203ENST00000462729 1002 ntBASIC15.11■□□□□ 0.01
C11orf42Q8N5U0 AC034232.1-201ENST00000506026 1064 ntBASIC15.11■□□□□ 0.01
C11orf42Q8N5U0 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC15.11■□□□□ 0.01
C11orf42Q8N5U0 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC15.11■□□□□ 0.01
C11orf42Q8N5U0 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
C11orf42Q8N5U0 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC15.11■□□□□ 0.01
C11orf42Q8N5U0 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
C11orf42Q8N5U0 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
C11orf42Q8N5U0 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC15.11■□□□□ 0.01
C11orf42Q8N5U0 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C11orf42Q8N5U0 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C11orf42Q8N5U0 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C11orf42Q8N5U0 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
C11orf42Q8N5U0 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C11orf42Q8N5U0 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
C11orf42Q8N5U0 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C11orf42Q8N5U0 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C11orf42Q8N5U0 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC15.11■□□□□ 0.01
C11orf42Q8N5U0 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC15.11■□□□□ 0.01
C11orf42Q8N5U0 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C11orf42Q8N5U0 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C11orf42Q8N5U0 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C11orf42Q8N5U0 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms