Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATPAF2Q8N5M1 AC093010.1-201ENST00000473625 1624 ntBASIC18.63■□□□□ 0.57
ATPAF2Q8N5M1 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATPAF2Q8N5M1 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
ATPAF2Q8N5M1 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATPAF2Q8N5M1 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.62■□□□□ 0.57
ATPAF2Q8N5M1 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATPAF2Q8N5M1 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATPAF2Q8N5M1 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.62■□□□□ 0.57
ATPAF2Q8N5M1 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.62■□□□□ 0.57
ATPAF2Q8N5M1 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATPAF2Q8N5M1 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATPAF2Q8N5M1 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATPAF2Q8N5M1 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATPAF2Q8N5M1 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.62■□□□□ 0.57
ATPAF2Q8N5M1 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.62■□□□□ 0.57
ATPAF2Q8N5M1 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.62■□□□□ 0.57
ATPAF2Q8N5M1 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATPAF2Q8N5M1 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATPAF2Q8N5M1 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ATPAF2Q8N5M1 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.62■□□□□ 0.57
ATPAF2Q8N5M1 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATPAF2Q8N5M1 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATPAF2Q8N5M1 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
ATPAF2Q8N5M1 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.62■□□□□ 0.57
ATPAF2Q8N5M1 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.62■□□□□ 0.57
ATPAF2Q8N5M1 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATPAF2Q8N5M1 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
ATPAF2Q8N5M1 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATPAF2Q8N5M1 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.61■□□□□ 0.57
ATPAF2Q8N5M1 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
ATPAF2Q8N5M1 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ATPAF2Q8N5M1 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
ATPAF2Q8N5M1 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATPAF2Q8N5M1 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATPAF2Q8N5M1 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.61■□□□□ 0.57
ATPAF2Q8N5M1 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATPAF2Q8N5M1 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATPAF2Q8N5M1 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.61■□□□□ 0.57
ATPAF2Q8N5M1 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.61■□□□□ 0.57
ATPAF2Q8N5M1 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATPAF2Q8N5M1 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
ATPAF2Q8N5M1 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
ATPAF2Q8N5M1 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
ATPAF2Q8N5M1 LINC01311-201ENST00000565162 1445 ntBASIC18.61■□□□□ 0.57
ATPAF2Q8N5M1 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.61■□□□□ 0.57
ATPAF2Q8N5M1 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATPAF2Q8N5M1 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATPAF2Q8N5M1 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATPAF2Q8N5M1 HBZP1-201ENST00000354915 429 ntBASIC18.61■□□□□ 0.57
ATPAF2Q8N5M1 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATPAF2Q8N5M1 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.61■□□□□ 0.57
ATPAF2Q8N5M1 AL049597.2-201ENST00000565575 961 ntBASIC18.61■□□□□ 0.57
ATPAF2Q8N5M1 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.61■□□□□ 0.57
ATPAF2Q8N5M1 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.61■□□□□ 0.57
ATPAF2Q8N5M1 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.61■□□□□ 0.57
ATPAF2Q8N5M1 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
ATPAF2Q8N5M1 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATPAF2Q8N5M1 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.61■□□□□ 0.57
ATPAF2Q8N5M1 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATPAF2Q8N5M1 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.61■□□□□ 0.57
ATPAF2Q8N5M1 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
ATPAF2Q8N5M1 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATPAF2Q8N5M1 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.61■□□□□ 0.57
ATPAF2Q8N5M1 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATPAF2Q8N5M1 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.61■□□□□ 0.57
ATPAF2Q8N5M1 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.6■□□□□ 0.57
ATPAF2Q8N5M1 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
ATPAF2Q8N5M1 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
ATPAF2Q8N5M1 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATPAF2Q8N5M1 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATPAF2Q8N5M1 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
ATPAF2Q8N5M1 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATPAF2Q8N5M1 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.6■□□□□ 0.57
ATPAF2Q8N5M1 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATPAF2Q8N5M1 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATPAF2Q8N5M1 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATPAF2Q8N5M1 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATPAF2Q8N5M1 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATPAF2Q8N5M1 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATPAF2Q8N5M1 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATPAF2Q8N5M1 AL671277.2-201ENST00000458060 996 ntBASIC18.6■□□□□ 0.57
ATPAF2Q8N5M1 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATPAF2Q8N5M1 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.6■□□□□ 0.57
ATPAF2Q8N5M1 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.6■□□□□ 0.57
ATPAF2Q8N5M1 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.6■□□□□ 0.57
ATPAF2Q8N5M1 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATPAF2Q8N5M1 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATPAF2Q8N5M1 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATPAF2Q8N5M1 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
ATPAF2Q8N5M1 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATPAF2Q8N5M1 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ATPAF2Q8N5M1 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ATPAF2Q8N5M1 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
ATPAF2Q8N5M1 KRT89P-201ENST00000620027 1478 ntBASIC18.59■□□□□ 0.57
ATPAF2Q8N5M1 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATPAF2Q8N5M1 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ATPAF2Q8N5M1 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.59■□□□□ 0.57
ATPAF2Q8N5M1 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATPAF2Q8N5M1 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms