Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC25.02■■□□□ 1.6
ARHGEF28Q8N1W1 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC25.02■■□□□ 1.6
ARHGEF28Q8N1W1 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC25.01■■□□□ 1.59
ARHGEF28Q8N1W1 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC25.01■■□□□ 1.59
ARHGEF28Q8N1W1 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
ARHGEF28Q8N1W1 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
ARHGEF28Q8N1W1 KLF4P1-201ENST00000412782 1185 ntBASIC25.01■■□□□ 1.59
ARHGEF28Q8N1W1 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
ARHGEF28Q8N1W1 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC25.01■■□□□ 1.59
ARHGEF28Q8N1W1 PIN1-206ENST00000587625 878 ntTSL 2 BASIC25.01■■□□□ 1.59
ARHGEF28Q8N1W1 AC107918.4-202ENST00000641623 219 ntBASIC25.01■■□□□ 1.59
ARHGEF28Q8N1W1 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC25.01■■□□□ 1.59
ARHGEF28Q8N1W1 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC25.01■■□□□ 1.59
ARHGEF28Q8N1W1 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
ARHGEF28Q8N1W1 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
ARHGEF28Q8N1W1 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC25.01■■□□□ 1.59
ARHGEF28Q8N1W1 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
ARHGEF28Q8N1W1 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
ARHGEF28Q8N1W1 ADM-208ENST00000534464 1640 ntTSL 2 BASIC25.01■■□□□ 1.59
ARHGEF28Q8N1W1 FAM220CP-201ENST00000395253 831 ntBASIC25■■□□□ 1.59
ARHGEF28Q8N1W1 RPL13AP23-201ENST00000480739 586 ntBASIC25■■□□□ 1.59
ARHGEF28Q8N1W1 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC25■■□□□ 1.59
ARHGEF28Q8N1W1 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
ARHGEF28Q8N1W1 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
ARHGEF28Q8N1W1 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
ARHGEF28Q8N1W1 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
ARHGEF28Q8N1W1 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC25■■□□□ 1.59
ARHGEF28Q8N1W1 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC25■■□□□ 1.59
ARHGEF28Q8N1W1 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC25■■□□□ 1.59
ARHGEF28Q8N1W1 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
ARHGEF28Q8N1W1 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
ARHGEF28Q8N1W1 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
ARHGEF28Q8N1W1 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
ARHGEF28Q8N1W1 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC25■■□□□ 1.59
ARHGEF28Q8N1W1 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC25■■□□□ 1.59
ARHGEF28Q8N1W1 Z83851.2-201ENST00000609564 659 ntBASIC25■■□□□ 1.59
ARHGEF28Q8N1W1 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
ARHGEF28Q8N1W1 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
ARHGEF28Q8N1W1 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
ARHGEF28Q8N1W1 AP002414.3-201ENST00000589352 1468 ntBASIC24.99■■□□□ 1.59
ARHGEF28Q8N1W1 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
ARHGEF28Q8N1W1 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
ARHGEF28Q8N1W1 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC24.99■■□□□ 1.59
ARHGEF28Q8N1W1 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC24.99■■□□□ 1.59
ARHGEF28Q8N1W1 AC092910.1-201ENST00000482027 1129 ntBASIC24.99■■□□□ 1.59
ARHGEF28Q8N1W1 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC24.99■■□□□ 1.59
ARHGEF28Q8N1W1 NKAPP1-205ENST00000585790 367 ntBASIC24.99■■□□□ 1.59
ARHGEF28Q8N1W1 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC24.99■■□□□ 1.59
ARHGEF28Q8N1W1 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
ARHGEF28Q8N1W1 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
ARHGEF28Q8N1W1 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC24.99■■□□□ 1.59
ARHGEF28Q8N1W1 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
ARHGEF28Q8N1W1 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
ARHGEF28Q8N1W1 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
ARHGEF28Q8N1W1 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
ARHGEF28Q8N1W1 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
ARHGEF28Q8N1W1 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
ARHGEF28Q8N1W1 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
ARHGEF28Q8N1W1 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
ARHGEF28Q8N1W1 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
ARHGEF28Q8N1W1 AC093909.1-201ENST00000504731 1122 ntBASIC24.98■■□□□ 1.59
ARHGEF28Q8N1W1 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC24.98■■□□□ 1.59
ARHGEF28Q8N1W1 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
ARHGEF28Q8N1W1 SDCCAG3P1-201ENST00000589292 1150 ntBASIC24.98■■□□□ 1.59
ARHGEF28Q8N1W1 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC24.98■■□□□ 1.59
ARHGEF28Q8N1W1 AP000867.4-201ENST00000641616 219 ntBASIC24.98■■□□□ 1.59
ARHGEF28Q8N1W1 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
ARHGEF28Q8N1W1 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
ARHGEF28Q8N1W1 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC24.98■■□□□ 1.59
ARHGEF28Q8N1W1 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
ARHGEF28Q8N1W1 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
ARHGEF28Q8N1W1 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
ARHGEF28Q8N1W1 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
ARHGEF28Q8N1W1 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
ARHGEF28Q8N1W1 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
ARHGEF28Q8N1W1 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
ARHGEF28Q8N1W1 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
ARHGEF28Q8N1W1 LAGE3P1-201ENST00000425356 484 ntBASIC24.98■■□□□ 1.59
ARHGEF28Q8N1W1 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC24.98■■□□□ 1.59
ARHGEF28Q8N1W1 MED29-202ENST00000594368 1471 ntTSL 2 BASIC24.98■■□□□ 1.59
ARHGEF28Q8N1W1 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
ARHGEF28Q8N1W1 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
ARHGEF28Q8N1W1 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC24.97■■□□□ 1.59
ARHGEF28Q8N1W1 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
ARHGEF28Q8N1W1 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
ARHGEF28Q8N1W1 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
ARHGEF28Q8N1W1 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
ARHGEF28Q8N1W1 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC24.97■■□□□ 1.59
ARHGEF28Q8N1W1 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
ARHGEF28Q8N1W1 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
ARHGEF28Q8N1W1 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC24.97■■□□□ 1.59
ARHGEF28Q8N1W1 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC24.97■■□□□ 1.59
ARHGEF28Q8N1W1 LBH-204ENST00000406087 559 ntTSL 4 BASIC24.97■■□□□ 1.59
ARHGEF28Q8N1W1 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC24.97■■□□□ 1.59
ARHGEF28Q8N1W1 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC24.97■■□□□ 1.59
ARHGEF28Q8N1W1 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
ARHGEF28Q8N1W1 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC24.97■■□□□ 1.59
ARHGEF28Q8N1W1 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
ARHGEF28Q8N1W1 AL353593.2-201ENST00000602529 1483 ntBASIC24.96■■□□□ 1.59
ARHGEF28Q8N1W1 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms