Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF546Q86UE3 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.12■□□□□ 0.01
ZNF546Q86UE3 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.12■□□□□ 0.01
ZNF546Q86UE3 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF546Q86UE3 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.12■□□□□ 0.01
ZNF546Q86UE3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF546Q86UE3 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF546Q86UE3 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF546Q86UE3 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF546Q86UE3 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.11■□□□□ 0.01
ZNF546Q86UE3 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF546Q86UE3 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF546Q86UE3 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF546Q86UE3 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF546Q86UE3 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
ZNF546Q86UE3 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
ZNF546Q86UE3 GUK1-205ENST00000366722 850 ntTSL 3 BASIC15.11■□□□□ 0.01
ZNF546Q86UE3 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF546Q86UE3 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF546Q86UE3 YBX1P10-201ENST00000444752 975 ntBASIC15.11■□□□□ 0.01
ZNF546Q86UE3 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC15.11■□□□□ 0.01
ZNF546Q86UE3 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC15.11■□□□□ 0.01
ZNF546Q86UE3 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
ZNF546Q86UE3 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF546Q86UE3 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF546Q86UE3 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF546Q86UE3 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF546Q86UE3 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF546Q86UE3 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
ZNF546Q86UE3 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
ZNF546Q86UE3 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF546Q86UE3 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
ZNF546Q86UE3 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC15.11■□□□□ 0.01
ZNF546Q86UE3 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF546Q86UE3 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF546Q86UE3 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF546Q86UE3 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC15.11■□□□□ 0.01
ZNF546Q86UE3 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.11■□□□□ 0.01
ZNF546Q86UE3 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.1■□□□□ 0.01
ZNF546Q86UE3 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF546Q86UE3 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.1■□□□□ 0.01
ZNF546Q86UE3 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF546Q86UE3 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.1■□□□□ 0.01
ZNF546Q86UE3 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
ZNF546Q86UE3 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.1■□□□□ 0.01
ZNF546Q86UE3 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF546Q86UE3 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
ZNF546Q86UE3 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
ZNF546Q86UE3 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF546Q86UE3 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF546Q86UE3 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF546Q86UE3 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
ZNF546Q86UE3 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF546Q86UE3 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.1■□□□□ 0.01
ZNF546Q86UE3 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF546Q86UE3 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF546Q86UE3 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF546Q86UE3 KATNBL1P6-202ENST00000562413 1466 ntBASIC15.1■□□□□ 0.01
ZNF546Q86UE3 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
ZNF546Q86UE3 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
ZNF546Q86UE3 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF546Q86UE3 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
ZNF546Q86UE3 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF546Q86UE3 LSM12P1-201ENST00000411836 588 ntBASIC15.1■□□□□ 0.01
ZNF546Q86UE3 AL390719.1-204ENST00000412397 1219 ntBASIC15.1■□□□□ 0.01
ZNF546Q86UE3 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
ZNF546Q86UE3 APTR-203ENST00000430801 583 ntTSL 5 BASIC15.1■□□□□ 0.01
ZNF546Q86UE3 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC15.1■□□□□ 0.01
ZNF546Q86UE3 SERP1-205ENST00000487153 657 ntTSL 4 BASIC15.1■□□□□ 0.01
ZNF546Q86UE3 ISCU-212ENST00000547005 795 ntTSL 3 BASIC15.1■□□□□ 0.01
ZNF546Q86UE3 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
ZNF546Q86UE3 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC15.1■□□□□ 0.01
ZNF546Q86UE3 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF546Q86UE3 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC15.1■□□□□ 0.01
ZNF546Q86UE3 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF546Q86UE3 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF546Q86UE3 AC011767.1-201ENST00000617410 1153 ntBASIC15.1■□□□□ 0.01
ZNF546Q86UE3 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC15.1■□□□□ 0.01
ZNF546Q86UE3 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
ZNF546Q86UE3 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF546Q86UE3 PCDHA1-201ENST00000378133 2726 ntBASIC15.1■□□□□ 0.01
ZNF546Q86UE3 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF546Q86UE3 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF546Q86UE3 CROCCP2-202ENST00000412962 2773 ntBASIC15.1■□□□□ 0.01
ZNF546Q86UE3 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF546Q86UE3 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF546Q86UE3 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF546Q86UE3 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
ZNF546Q86UE3 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
ZNF546Q86UE3 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
ZNF546Q86UE3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF546Q86UE3 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.1■□□□□ 0.01
ZNF546Q86UE3 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF546Q86UE3 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF546Q86UE3 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF546Q86UE3 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.09■□□□□ 0.01
ZNF546Q86UE3 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF546Q86UE3 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF546Q86UE3 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF546Q86UE3 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms