Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
MRPL55Q7Z7F7 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
MRPL55Q7Z7F7 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
MRPL55Q7Z7F7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
MRPL55Q7Z7F7 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
MRPL55Q7Z7F7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
MRPL55Q7Z7F7 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
MRPL55Q7Z7F7 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
MRPL55Q7Z7F7 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
MRPL55Q7Z7F7 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC11.71□□□□□ -0.53
MRPL55Q7Z7F7 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC11.71□□□□□ -0.53
MRPL55Q7Z7F7 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
MRPL55Q7Z7F7 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
MRPL55Q7Z7F7 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
MRPL55Q7Z7F7 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
MRPL55Q7Z7F7 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
MRPL55Q7Z7F7 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC11.71□□□□□ -0.53
MRPL55Q7Z7F7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
MRPL55Q7Z7F7 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
MRPL55Q7Z7F7 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
MRPL55Q7Z7F7 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
MRPL55Q7Z7F7 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
MRPL55Q7Z7F7 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
MRPL55Q7Z7F7 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC11.71□□□□□ -0.53
MRPL55Q7Z7F7 NOC2LP2-201ENST00000407594 1944 ntBASIC11.71□□□□□ -0.53
MRPL55Q7Z7F7 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
MRPL55Q7Z7F7 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
MRPL55Q7Z7F7 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC11.71□□□□□ -0.53
MRPL55Q7Z7F7 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
MRPL55Q7Z7F7 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
MRPL55Q7Z7F7 AC098590.1-201ENST00000468126 897 ntBASIC11.71□□□□□ -0.53
MRPL55Q7Z7F7 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC11.71□□□□□ -0.53
MRPL55Q7Z7F7 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC11.71□□□□□ -0.53
MRPL55Q7Z7F7 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
MRPL55Q7Z7F7 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC11.71□□□□□ -0.53
MRPL55Q7Z7F7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC11.71□□□□□ -0.53
MRPL55Q7Z7F7 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC11.71□□□□□ -0.53
MRPL55Q7Z7F7 MIR3180-5-201ENST00000583743 153 ntBASIC11.71□□□□□ -0.53
MRPL55Q7Z7F7 REXO1L10P-201ENST00000615707 1290 ntBASIC11.71□□□□□ -0.53
MRPL55Q7Z7F7 REXO1L12P-201ENST00000622156 912 ntBASIC11.71□□□□□ -0.53
MRPL55Q7Z7F7 AC113410.3-201ENST00000623366 203 ntBASIC11.71□□□□□ -0.53
MRPL55Q7Z7F7 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC11.71□□□□□ -0.53
MRPL55Q7Z7F7 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
MRPL55Q7Z7F7 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
MRPL55Q7Z7F7 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
MRPL55Q7Z7F7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC11.71□□□□□ -0.54
MRPL55Q7Z7F7 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC11.71□□□□□ -0.54
MRPL55Q7Z7F7 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
MRPL55Q7Z7F7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
MRPL55Q7Z7F7 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
MRPL55Q7Z7F7 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
MRPL55Q7Z7F7 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC11.71□□□□□ -0.54
MRPL55Q7Z7F7 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 MME-217ENST00000616757 1315 ntTSL 5 BASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 BAALC-201ENST00000297574 801 ntTSL 3 BASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 MIR718-201ENST00000390190 70 ntBASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 FDX2-206ENST00000492239 773 ntTSL 2 BASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 AC026471.5-201ENST00000615068 467 ntBASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 GMCL1P1-201ENST00000463439 1581 ntBASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms