Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NHLRC1Q6VVB1 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NHLRC1Q6VVB1 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NHLRC1Q6VVB1 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NHLRC1Q6VVB1 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NHLRC1Q6VVB1 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.31■□□□□ 0.2
NHLRC1Q6VVB1 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NHLRC1Q6VVB1 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.31■□□□□ 0.2
NHLRC1Q6VVB1 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.31■□□□□ 0.2
NHLRC1Q6VVB1 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.31■□□□□ 0.2
NHLRC1Q6VVB1 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NHLRC1Q6VVB1 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NHLRC1Q6VVB1 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.31■□□□□ 0.2
NHLRC1Q6VVB1 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
NHLRC1Q6VVB1 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NHLRC1Q6VVB1 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
NHLRC1Q6VVB1 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NHLRC1Q6VVB1 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NHLRC1Q6VVB1 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NHLRC1Q6VVB1 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NHLRC1Q6VVB1 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NHLRC1Q6VVB1 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NHLRC1Q6VVB1 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NHLRC1Q6VVB1 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.31■□□□□ 0.2
NHLRC1Q6VVB1 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NHLRC1Q6VVB1 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NHLRC1Q6VVB1 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NHLRC1Q6VVB1 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NHLRC1Q6VVB1 BX664615.1-201ENST00000443558 458 ntBASIC16.31■□□□□ 0.2
NHLRC1Q6VVB1 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NHLRC1Q6VVB1 COX11P1-201ENST00000489116 835 ntBASIC16.31■□□□□ 0.2
NHLRC1Q6VVB1 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
NHLRC1Q6VVB1 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NHLRC1Q6VVB1 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.31■□□□□ 0.2
NHLRC1Q6VVB1 AC009065.1-201ENST00000564055 1225 ntBASIC16.31■□□□□ 0.2
NHLRC1Q6VVB1 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.31■□□□□ 0.2
NHLRC1Q6VVB1 AL023973.1-201ENST00000624619 620 ntBASIC16.31■□□□□ 0.2
NHLRC1Q6VVB1 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NHLRC1Q6VVB1 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NHLRC1Q6VVB1 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
NHLRC1Q6VVB1 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.31■□□□□ 0.2
NHLRC1Q6VVB1 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NHLRC1Q6VVB1 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.31■□□□□ 0.2
NHLRC1Q6VVB1 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.31■□□□□ 0.2
NHLRC1Q6VVB1 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NHLRC1Q6VVB1 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
NHLRC1Q6VVB1 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
NHLRC1Q6VVB1 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
NHLRC1Q6VVB1 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
NHLRC1Q6VVB1 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NHLRC1Q6VVB1 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NHLRC1Q6VVB1 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NHLRC1Q6VVB1 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NHLRC1Q6VVB1 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NHLRC1Q6VVB1 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NHLRC1Q6VVB1 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
NHLRC1Q6VVB1 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NHLRC1Q6VVB1 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.3■□□□□ 0.2
NHLRC1Q6VVB1 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NHLRC1Q6VVB1 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.3■□□□□ 0.2
NHLRC1Q6VVB1 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.3■□□□□ 0.2
NHLRC1Q6VVB1 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NHLRC1Q6VVB1 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
NHLRC1Q6VVB1 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NHLRC1Q6VVB1 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
NHLRC1Q6VVB1 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NHLRC1Q6VVB1 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
NHLRC1Q6VVB1 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NHLRC1Q6VVB1 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NHLRC1Q6VVB1 AL137013.1-201ENST00000432946 1228 ntBASIC16.3■□□□□ 0.2
NHLRC1Q6VVB1 PVRIG2P-201ENST00000435460 978 ntBASIC16.3■□□□□ 0.2
NHLRC1Q6VVB1 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.3■□□□□ 0.2
NHLRC1Q6VVB1 LINC01023-201ENST00000606054 436 ntBASIC16.3■□□□□ 0.2
NHLRC1Q6VVB1 AL031432.5-201ENST00000641059 760 ntBASIC16.3■□□□□ 0.2
NHLRC1Q6VVB1 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.3■□□□□ 0.2
NHLRC1Q6VVB1 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NHLRC1Q6VVB1 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NHLRC1Q6VVB1 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
NHLRC1Q6VVB1 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
NHLRC1Q6VVB1 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NHLRC1Q6VVB1 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NHLRC1Q6VVB1 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NHLRC1Q6VVB1 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NHLRC1Q6VVB1 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NHLRC1Q6VVB1 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NHLRC1Q6VVB1 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
NHLRC1Q6VVB1 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NHLRC1Q6VVB1 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
NHLRC1Q6VVB1 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NHLRC1Q6VVB1 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NHLRC1Q6VVB1 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
NHLRC1Q6VVB1 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
NHLRC1Q6VVB1 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NHLRC1Q6VVB1 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
NHLRC1Q6VVB1 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NHLRC1Q6VVB1 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NHLRC1Q6VVB1 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NHLRC1Q6VVB1 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NHLRC1Q6VVB1 AC117947.1-201ENST00000427448 529 ntBASIC16.29■□□□□ 0.2
NHLRC1Q6VVB1 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 436.3 ms