Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LYSMD4Q5XG99 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LYSMD4Q5XG99 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LYSMD4Q5XG99 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LYSMD4Q5XG99 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LYSMD4Q5XG99 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LYSMD4Q5XG99 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
LYSMD4Q5XG99 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LYSMD4Q5XG99 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LYSMD4Q5XG99 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
LYSMD4Q5XG99 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
LYSMD4Q5XG99 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LYSMD4Q5XG99 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LYSMD4Q5XG99 AC004832.2-201ENST00000426397 482 ntBASIC17.76■□□□□ 0.43
LYSMD4Q5XG99 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.76■□□□□ 0.43
LYSMD4Q5XG99 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LYSMD4Q5XG99 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.76■□□□□ 0.43
LYSMD4Q5XG99 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LYSMD4Q5XG99 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.76■□□□□ 0.43
LYSMD4Q5XG99 MIR1199-201ENST00000621445 119 ntBASIC17.76■□□□□ 0.43
LYSMD4Q5XG99 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
LYSMD4Q5XG99 AP000867.4-201ENST00000641616 219 ntBASIC17.76■□□□□ 0.43
LYSMD4Q5XG99 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
LYSMD4Q5XG99 CLDN5-201ENST00000403084 2357 ntBASIC17.76■□□□□ 0.43
LYSMD4Q5XG99 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LYSMD4Q5XG99 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
LYSMD4Q5XG99 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LYSMD4Q5XG99 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LYSMD4Q5XG99 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
LYSMD4Q5XG99 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LYSMD4Q5XG99 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LYSMD4Q5XG99 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LYSMD4Q5XG99 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LYSMD4Q5XG99 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.75■□□□□ 0.43
LYSMD4Q5XG99 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LYSMD4Q5XG99 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.75■□□□□ 0.43
LYSMD4Q5XG99 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
LYSMD4Q5XG99 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LYSMD4Q5XG99 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LYSMD4Q5XG99 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
LYSMD4Q5XG99 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LYSMD4Q5XG99 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LYSMD4Q5XG99 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LYSMD4Q5XG99 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LYSMD4Q5XG99 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LYSMD4Q5XG99 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
LYSMD4Q5XG99 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LYSMD4Q5XG99 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.75■□□□□ 0.43
LYSMD4Q5XG99 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.75■□□□□ 0.43
LYSMD4Q5XG99 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.75■□□□□ 0.43
LYSMD4Q5XG99 AC134684.3-201ENST00000641758 218 ntBASIC17.75■□□□□ 0.43
LYSMD4Q5XG99 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LYSMD4Q5XG99 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.75■□□□□ 0.43
LYSMD4Q5XG99 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.75■□□□□ 0.43
LYSMD4Q5XG99 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.75■□□□□ 0.43
LYSMD4Q5XG99 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
LYSMD4Q5XG99 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.75■□□□□ 0.43
LYSMD4Q5XG99 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LYSMD4Q5XG99 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.75■□□□□ 0.43
LYSMD4Q5XG99 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LYSMD4Q5XG99 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LYSMD4Q5XG99 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.74■□□□□ 0.43
LYSMD4Q5XG99 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
LYSMD4Q5XG99 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
LYSMD4Q5XG99 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
LYSMD4Q5XG99 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.74■□□□□ 0.43
LYSMD4Q5XG99 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
LYSMD4Q5XG99 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.74■□□□□ 0.43
LYSMD4Q5XG99 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.74■□□□□ 0.43
LYSMD4Q5XG99 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LYSMD4Q5XG99 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.74■□□□□ 0.43
LYSMD4Q5XG99 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LYSMD4Q5XG99 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.74■□□□□ 0.43
LYSMD4Q5XG99 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LYSMD4Q5XG99 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.74■□□□□ 0.43
LYSMD4Q5XG99 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LYSMD4Q5XG99 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LYSMD4Q5XG99 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.74■□□□□ 0.43
LYSMD4Q5XG99 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.74■□□□□ 0.43
LYSMD4Q5XG99 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LYSMD4Q5XG99 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
LYSMD4Q5XG99 AC009947.1-201ENST00000444350 727 ntBASIC17.74■□□□□ 0.43
LYSMD4Q5XG99 BX005266.1-201ENST00000473402 457 ntBASIC17.74■□□□□ 0.43
LYSMD4Q5XG99 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LYSMD4Q5XG99 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.74■□□□□ 0.43
LYSMD4Q5XG99 AC027796.2-201ENST00000575326 344 ntBASIC17.74■□□□□ 0.43
LYSMD4Q5XG99 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.74■□□□□ 0.43
LYSMD4Q5XG99 AL049812.1-201ENST00000432563 2267 ntBASIC17.74■□□□□ 0.43
LYSMD4Q5XG99 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
LYSMD4Q5XG99 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LYSMD4Q5XG99 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LYSMD4Q5XG99 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
LYSMD4Q5XG99 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
LYSMD4Q5XG99 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.73■□□□□ 0.43
LYSMD4Q5XG99 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
LYSMD4Q5XG99 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LYSMD4Q5XG99 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.73■□□□□ 0.43
LYSMD4Q5XG99 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LYSMD4Q5XG99 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LYSMD4Q5XG99 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms