Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 HR-201ENST00000312841 5351 ntTSL 5 BASIC21.7■■□□□ 1.06
RNF20Q5VTR2 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF20Q5VTR2 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC21.7■■□□□ 1.06
RNF20Q5VTR2 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.7■■□□□ 1.06
RNF20Q5VTR2 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
RNF20Q5VTR2 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.7■■□□□ 1.06
RNF20Q5VTR2 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
RNF20Q5VTR2 AL133373.2-201ENST00000623187 2828 ntBASIC21.7■■□□□ 1.06
RNF20Q5VTR2 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC21.7■■□□□ 1.06
RNF20Q5VTR2 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF20Q5VTR2 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF20Q5VTR2 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF20Q5VTR2 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF20Q5VTR2 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RNF20Q5VTR2 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RNF20Q5VTR2 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF20Q5VTR2 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC21.69■■□□□ 1.06
RNF20Q5VTR2 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF20Q5VTR2 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
RNF20Q5VTR2 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF20Q5VTR2 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RNF20Q5VTR2 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF20Q5VTR2 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF20Q5VTR2 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC21.69■■□□□ 1.06
RNF20Q5VTR2 MNT-208ENST00000575394 606 ntTSL 4 BASIC21.69■■□□□ 1.06
RNF20Q5VTR2 LINC01023-201ENST00000606054 436 ntBASIC21.69■■□□□ 1.06
RNF20Q5VTR2 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC21.69■■□□□ 1.06
RNF20Q5VTR2 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF20Q5VTR2 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF20Q5VTR2 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC21.69■■□□□ 1.06
RNF20Q5VTR2 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF20Q5VTR2 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RNF20Q5VTR2 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF20Q5VTR2 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF20Q5VTR2 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
RNF20Q5VTR2 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF20Q5VTR2 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
RNF20Q5VTR2 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC21.69■■□□□ 1.06
RNF20Q5VTR2 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RNF20Q5VTR2 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF20Q5VTR2 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF20Q5VTR2 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC21.69■■□□□ 1.06
RNF20Q5VTR2 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC21.69■■□□□ 1.06
RNF20Q5VTR2 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF20Q5VTR2 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF20Q5VTR2 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC21.68■■□□□ 1.06
RNF20Q5VTR2 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
RNF20Q5VTR2 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF20Q5VTR2 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC21.68■■□□□ 1.06
RNF20Q5VTR2 AC068880.1-201ENST00000507289 2297 ntBASIC21.68■■□□□ 1.06
RNF20Q5VTR2 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF20Q5VTR2 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC21.68■■□□□ 1.06
RNF20Q5VTR2 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF20Q5VTR2 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF20Q5VTR2 AC211429.1-201ENST00000415277 523 ntBASIC21.68■■□□□ 1.06
RNF20Q5VTR2 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.68■■□□□ 1.06
RNF20Q5VTR2 RASA4DP-201ENST00000460726 1199 ntBASIC21.68■■□□□ 1.06
RNF20Q5VTR2 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.68■■□□□ 1.06
RNF20Q5VTR2 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF20Q5VTR2 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.68■■□□□ 1.06
RNF20Q5VTR2 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC21.68■■□□□ 1.06
RNF20Q5VTR2 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC21.68■■□□□ 1.06
RNF20Q5VTR2 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
RNF20Q5VTR2 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF20Q5VTR2 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
RNF20Q5VTR2 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF20Q5VTR2 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF20Q5VTR2 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC21.68■■□□□ 1.06
RNF20Q5VTR2 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC21.68■■□□□ 1.06
RNF20Q5VTR2 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
RNF20Q5VTR2 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF20Q5VTR2 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF20Q5VTR2 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC21.67■■□□□ 1.06
RNF20Q5VTR2 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC21.67■■□□□ 1.06
RNF20Q5VTR2 AP000997.3-201ENST00000623333 2250 ntBASIC21.67■■□□□ 1.06
RNF20Q5VTR2 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF20Q5VTR2 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF20Q5VTR2 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF20Q5VTR2 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF20Q5VTR2 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC21.67■■□□□ 1.06
RNF20Q5VTR2 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF20Q5VTR2 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
RNF20Q5VTR2 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC21.67■■□□□ 1.06
RNF20Q5VTR2 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC21.67■■□□□ 1.06
RNF20Q5VTR2 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RNF20Q5VTR2 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RNF20Q5VTR2 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
RNF20Q5VTR2 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF20Q5VTR2 AC073508.3-201ENST00000619697 1419 ntBASIC21.67■■□□□ 1.06
RNF20Q5VTR2 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF20Q5VTR2 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC21.67■■□□□ 1.06
RNF20Q5VTR2 AL441883.1-201ENST00000566170 1045 ntBASIC21.67■■□□□ 1.06
RNF20Q5VTR2 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.67■■□□□ 1.06
RNF20Q5VTR2 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
RNF20Q5VTR2 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
RNF20Q5VTR2 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
RNF20Q5VTR2 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC21.67■■□□□ 1.06
RNF20Q5VTR2 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC21.67■■□□□ 1.06
RNF20Q5VTR2 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF20Q5VTR2 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms