Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.65■□□□□ 0.1
LRRK2Q5S007 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRRK2Q5S007 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRRK2Q5S007 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRK2Q5S007 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRK2Q5S007 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LRRK2Q5S007 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.65■□□□□ 0.1
LRRK2Q5S007 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRK2Q5S007 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRRK2Q5S007 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRK2Q5S007 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
LRRK2Q5S007 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
LRRK2Q5S007 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRK2Q5S007 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LRRK2Q5S007 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRK2Q5S007 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
LRRK2Q5S007 NME2P1-201ENST00000426182 414 ntBASIC15.65■□□□□ 0.1
LRRK2Q5S007 AC067863.1-201ENST00000494933 530 ntBASIC15.65■□□□□ 0.1
LRRK2Q5S007 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.65■□□□□ 0.1
LRRK2Q5S007 OR7E47P-204ENST00000575924 449 ntBASIC15.65■□□□□ 0.1
LRRK2Q5S007 MIR4751-201ENST00000578027 74 ntBASIC15.65■□□□□ 0.1
LRRK2Q5S007 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
LRRK2Q5S007 AC008687.5-201ENST00000593746 558 ntBASIC15.65■□□□□ 0.1
LRRK2Q5S007 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.65■□□□□ 0.1
LRRK2Q5S007 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRK2Q5S007 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC15.65■□□□□ 0.1
LRRK2Q5S007 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRRK2Q5S007 MTMR9LP-203ENST00000426597 1545 ntBASIC15.65■□□□□ 0.1
LRRK2Q5S007 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRK2Q5S007 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRK2Q5S007 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
LRRK2Q5S007 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
LRRK2Q5S007 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRK2Q5S007 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRK2Q5S007 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.64■□□□□ 0.09
LRRK2Q5S007 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.64■□□□□ 0.09
LRRK2Q5S007 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
LRRK2Q5S007 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.64■□□□□ 0.09
LRRK2Q5S007 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.64■□□□□ 0.09
LRRK2Q5S007 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
LRRK2Q5S007 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRK2Q5S007 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRK2Q5S007 AL121761.2-201ENST00000598007 1648 ntBASIC15.64■□□□□ 0.09
LRRK2Q5S007 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRRK2Q5S007 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRK2Q5S007 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRK2Q5S007 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRRK2Q5S007 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRK2Q5S007 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.64■□□□□ 0.09
LRRK2Q5S007 IGHV3-71-201ENST00000523324 359 ntBASIC15.64■□□□□ 0.09
LRRK2Q5S007 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.64■□□□□ 0.09
LRRK2Q5S007 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
LRRK2Q5S007 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRRK2Q5S007 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRK2Q5S007 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRRK2Q5S007 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRRK2Q5S007 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRRK2Q5S007 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRK2Q5S007 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
LRRK2Q5S007 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRRK2Q5S007 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRK2Q5S007 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRK2Q5S007 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRK2Q5S007 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
LRRK2Q5S007 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRK2Q5S007 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRK2Q5S007 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRRK2Q5S007 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRK2Q5S007 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRRK2Q5S007 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC15.63■□□□□ 0.09
LRRK2Q5S007 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.63■□□□□ 0.09
LRRK2Q5S007 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.63■□□□□ 0.09
LRRK2Q5S007 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRRK2Q5S007 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.63■□□□□ 0.09
LRRK2Q5S007 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.63■□□□□ 0.09
LRRK2Q5S007 AC004877.2-201ENST00000623941 599 ntBASIC15.63■□□□□ 0.09
LRRK2Q5S007 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRRK2Q5S007 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC15.63■□□□□ 0.09
LRRK2Q5S007 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.63■□□□□ 0.09
LRRK2Q5S007 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
LRRK2Q5S007 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRRK2Q5S007 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRK2Q5S007 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRK2Q5S007 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRRK2Q5S007 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRRK2Q5S007 AC099778.1-201ENST00000568593 1911 ntBASIC15.63■□□□□ 0.09
LRRK2Q5S007 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRK2Q5S007 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRK2Q5S007 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LRRK2Q5S007 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LRRK2Q5S007 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.62■□□□□ 0.09
LRRK2Q5S007 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.62■□□□□ 0.09
LRRK2Q5S007 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
LRRK2Q5S007 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LRRK2Q5S007 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.62■□□□□ 0.09
LRRK2Q5S007 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.62■□□□□ 0.09
LRRK2Q5S007 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.62■□□□□ 0.09
LRRK2Q5S007 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
LRRK2Q5S007 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.62■□□□□ 0.09
LRRK2Q5S007 AC068137.2-201ENST00000605408 478 ntBASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms