Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.93■□□□□ 0.62
ATP13A4Q4VNC1 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATP13A4Q4VNC1 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATP13A4Q4VNC1 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
ATP13A4Q4VNC1 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.93■□□□□ 0.62
ATP13A4Q4VNC1 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.93■□□□□ 0.62
ATP13A4Q4VNC1 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ATP13A4Q4VNC1 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.93■□□□□ 0.62
ATP13A4Q4VNC1 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.93■□□□□ 0.62
ATP13A4Q4VNC1 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.93■□□□□ 0.62
ATP13A4Q4VNC1 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ATP13A4Q4VNC1 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATP13A4Q4VNC1 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ATP13A4Q4VNC1 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
ATP13A4Q4VNC1 SLC25A6P5-201ENST00000435663 894 ntBASIC18.93■□□□□ 0.62
ATP13A4Q4VNC1 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.93■□□□□ 0.62
ATP13A4Q4VNC1 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.93■□□□□ 0.62
ATP13A4Q4VNC1 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.93■□□□□ 0.62
ATP13A4Q4VNC1 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ATP13A4Q4VNC1 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.93■□□□□ 0.62
ATP13A4Q4VNC1 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
ATP13A4Q4VNC1 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATP13A4Q4VNC1 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ATP13A4Q4VNC1 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.93■□□□□ 0.62
ATP13A4Q4VNC1 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
ATP13A4Q4VNC1 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATP13A4Q4VNC1 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATP13A4Q4VNC1 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATP13A4Q4VNC1 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.93■□□□□ 0.62
ATP13A4Q4VNC1 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.93■□□□□ 0.62
ATP13A4Q4VNC1 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.93■□□□□ 0.62
ATP13A4Q4VNC1 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATP13A4Q4VNC1 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
ATP13A4Q4VNC1 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATP13A4Q4VNC1 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
ATP13A4Q4VNC1 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
ATP13A4Q4VNC1 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.92■□□□□ 0.62
ATP13A4Q4VNC1 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.92■□□□□ 0.62
ATP13A4Q4VNC1 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.92■□□□□ 0.62
ATP13A4Q4VNC1 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATP13A4Q4VNC1 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.92■□□□□ 0.62
ATP13A4Q4VNC1 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.92■□□□□ 0.62
ATP13A4Q4VNC1 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATP13A4Q4VNC1 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATP13A4Q4VNC1 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ATP13A4Q4VNC1 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATP13A4Q4VNC1 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATP13A4Q4VNC1 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.92■□□□□ 0.62
ATP13A4Q4VNC1 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATP13A4Q4VNC1 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATP13A4Q4VNC1 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
ATP13A4Q4VNC1 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
ATP13A4Q4VNC1 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.92■□□□□ 0.62
ATP13A4Q4VNC1 AC012306.2-201ENST00000609350 630 ntBASIC18.92■□□□□ 0.62
ATP13A4Q4VNC1 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
ATP13A4Q4VNC1 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATP13A4Q4VNC1 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATP13A4Q4VNC1 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
ATP13A4Q4VNC1 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATP13A4Q4VNC1 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ATP13A4Q4VNC1 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATP13A4Q4VNC1 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATP13A4Q4VNC1 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
ATP13A4Q4VNC1 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ATP13A4Q4VNC1 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.92■□□□□ 0.62
ATP13A4Q4VNC1 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.91■□□□□ 0.62
ATP13A4Q4VNC1 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATP13A4Q4VNC1 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATP13A4Q4VNC1 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.91■□□□□ 0.62
ATP13A4Q4VNC1 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATP13A4Q4VNC1 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.91■□□□□ 0.62
ATP13A4Q4VNC1 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATP13A4Q4VNC1 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
ATP13A4Q4VNC1 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATP13A4Q4VNC1 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATP13A4Q4VNC1 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATP13A4Q4VNC1 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ATP13A4Q4VNC1 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
ATP13A4Q4VNC1 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
ATP13A4Q4VNC1 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
ATP13A4Q4VNC1 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.91■□□□□ 0.62
ATP13A4Q4VNC1 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.91■□□□□ 0.62
ATP13A4Q4VNC1 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ATP13A4Q4VNC1 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATP13A4Q4VNC1 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.91■□□□□ 0.62
ATP13A4Q4VNC1 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.91■□□□□ 0.62
ATP13A4Q4VNC1 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.91■□□□□ 0.62
ATP13A4Q4VNC1 AC092865.7-201ENST00000641832 219 ntBASIC18.91■□□□□ 0.62
ATP13A4Q4VNC1 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATP13A4Q4VNC1 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATP13A4Q4VNC1 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
ATP13A4Q4VNC1 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATP13A4Q4VNC1 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATP13A4Q4VNC1 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATP13A4Q4VNC1 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ATP13A4Q4VNC1 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATP13A4Q4VNC1 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.91■□□□□ 0.62
ATP13A4Q4VNC1 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.91■□□□□ 0.62
ATP13A4Q4VNC1 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ATP13A4Q4VNC1 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms