Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM71Q2Q1W2 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.75■□□□□ 0.75
TRIM71Q2Q1W2 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM71Q2Q1W2 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM71Q2Q1W2 AC005082.1-201ENST00000413042 2259 ntBASIC19.74■□□□□ 0.75
TRIM71Q2Q1W2 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
TRIM71Q2Q1W2 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.74■□□□□ 0.75
TRIM71Q2Q1W2 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM71Q2Q1W2 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM71Q2Q1W2 HLA-J-201ENST00000462773 1622 ntBASIC19.74■□□□□ 0.75
TRIM71Q2Q1W2 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM71Q2Q1W2 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
TRIM71Q2Q1W2 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM71Q2Q1W2 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.74■□□□□ 0.75
TRIM71Q2Q1W2 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM71Q2Q1W2 AC140113.2-201ENST00000604370 208 ntBASIC19.74■□□□□ 0.75
TRIM71Q2Q1W2 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM71Q2Q1W2 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM71Q2Q1W2 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM71Q2Q1W2 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM71Q2Q1W2 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.73■□□□□ 0.75
TRIM71Q2Q1W2 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM71Q2Q1W2 AC132938.6-201ENST00000623828 1655 ntBASIC19.73■□□□□ 0.75
TRIM71Q2Q1W2 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM71Q2Q1W2 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.73■□□□□ 0.75
TRIM71Q2Q1W2 AC092183.1-201ENST00000469884 875 ntBASIC19.73■□□□□ 0.75
TRIM71Q2Q1W2 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.73■□□□□ 0.75
TRIM71Q2Q1W2 AC092910.1-201ENST00000482027 1129 ntBASIC19.73■□□□□ 0.75
TRIM71Q2Q1W2 RNA5SP415-201ENST00000517246 115 ntBASIC19.73■□□□□ 0.75
TRIM71Q2Q1W2 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.73■□□□□ 0.75
TRIM71Q2Q1W2 AC027601.4-201ENST00000611259 610 ntBASIC19.73■□□□□ 0.75
TRIM71Q2Q1W2 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.73■□□□□ 0.75
TRIM71Q2Q1W2 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM71Q2Q1W2 AC008735.5-201ENST00000623544 497 ntBASIC19.73■□□□□ 0.75
TRIM71Q2Q1W2 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM71Q2Q1W2 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM71Q2Q1W2 AC073130.3-201ENST00000624389 2278 ntBASIC19.73■□□□□ 0.75
TRIM71Q2Q1W2 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
TRIM71Q2Q1W2 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM71Q2Q1W2 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
TRIM71Q2Q1W2 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM71Q2Q1W2 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.72■□□□□ 0.75
TRIM71Q2Q1W2 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM71Q2Q1W2 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM71Q2Q1W2 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM71Q2Q1W2 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM71Q2Q1W2 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
TRIM71Q2Q1W2 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.72■□□□□ 0.75
TRIM71Q2Q1W2 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM71Q2Q1W2 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM71Q2Q1W2 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM71Q2Q1W2 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM71Q2Q1W2 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM71Q2Q1W2 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.72■□□□□ 0.75
TRIM71Q2Q1W2 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.72■□□□□ 0.75
TRIM71Q2Q1W2 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.72■□□□□ 0.75
TRIM71Q2Q1W2 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.72■□□□□ 0.75
TRIM71Q2Q1W2 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.72■□□□□ 0.75
TRIM71Q2Q1W2 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.72■□□□□ 0.75
TRIM71Q2Q1W2 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.72■□□□□ 0.75
TRIM71Q2Q1W2 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.72■□□□□ 0.75
TRIM71Q2Q1W2 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.72■□□□□ 0.75
TRIM71Q2Q1W2 MTDHP4-201ENST00000600287 670 ntBASIC19.72■□□□□ 0.75
TRIM71Q2Q1W2 AL356488.2-201ENST00000602755 427 ntBASIC19.72■□□□□ 0.75
TRIM71Q2Q1W2 FAM197Y3-203ENST00000618346 717 ntBASIC19.72■□□□□ 0.75
TRIM71Q2Q1W2 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM71Q2Q1W2 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
TRIM71Q2Q1W2 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM71Q2Q1W2 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.72■□□□□ 0.75
TRIM71Q2Q1W2 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM71Q2Q1W2 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM71Q2Q1W2 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM71Q2Q1W2 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
TRIM71Q2Q1W2 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM71Q2Q1W2 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.71■□□□□ 0.75
TRIM71Q2Q1W2 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM71Q2Q1W2 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM71Q2Q1W2 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM71Q2Q1W2 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.71■□□□□ 0.75
TRIM71Q2Q1W2 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.71■□□□□ 0.75
TRIM71Q2Q1W2 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TRIM71Q2Q1W2 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
TRIM71Q2Q1W2 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM71Q2Q1W2 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM71Q2Q1W2 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM71Q2Q1W2 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.71■□□□□ 0.75
TRIM71Q2Q1W2 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM71Q2Q1W2 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.71■□□□□ 0.75
TRIM71Q2Q1W2 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.71■□□□□ 0.75
TRIM71Q2Q1W2 AC007967.3-201ENST00000434308 558 ntBASIC19.71■□□□□ 0.75
TRIM71Q2Q1W2 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.71■□□□□ 0.75
TRIM71Q2Q1W2 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM71Q2Q1W2 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.71■□□□□ 0.75
TRIM71Q2Q1W2 AC107918.4-202ENST00000641623 219 ntBASIC19.71■□□□□ 0.75
TRIM71Q2Q1W2 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.71■□□□□ 0.75
TRIM71Q2Q1W2 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM71Q2Q1W2 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM71Q2Q1W2 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM71Q2Q1W2 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.71■□□□□ 0.75
TRIM71Q2Q1W2 AC097374.2-201ENST00000618617 1306 ntBASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms