Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDC42EP1Q00587 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CDC42EP1Q00587 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CDC42EP1Q00587 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
CDC42EP1Q00587 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDC42EP1Q00587 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDC42EP1Q00587 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDC42EP1Q00587 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDC42EP1Q00587 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDC42EP1Q00587 AKR1C7P-201ENST00000305623 895 ntBASIC19.74■□□□□ 0.75
CDC42EP1Q00587 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.74■□□□□ 0.75
CDC42EP1Q00587 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.74■□□□□ 0.75
CDC42EP1Q00587 AC079781.3-201ENST00000449110 356 ntBASIC19.74■□□□□ 0.75
CDC42EP1Q00587 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.74■□□□□ 0.75
CDC42EP1Q00587 AF238378.1-201ENST00000526806 358 ntBASIC19.74■□□□□ 0.75
CDC42EP1Q00587 AP002469.2-201ENST00000531724 424 ntBASIC19.74■□□□□ 0.75
CDC42EP1Q00587 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.74■□□□□ 0.75
CDC42EP1Q00587 AC132938.6-201ENST00000623828 1655 ntBASIC19.74■□□□□ 0.75
CDC42EP1Q00587 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDC42EP1Q00587 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDC42EP1Q00587 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDC42EP1Q00587 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.74■□□□□ 0.75
CDC42EP1Q00587 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.74■□□□□ 0.75
CDC42EP1Q00587 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDC42EP1Q00587 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDC42EP1Q00587 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.73■□□□□ 0.75
CDC42EP1Q00587 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
CDC42EP1Q00587 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CDC42EP1Q00587 PHGDH-209ENST00000641074 1780 ntBASIC19.73■□□□□ 0.75
CDC42EP1Q00587 AC018445.3-201ENST00000624177 1945 ntBASIC19.73■□□□□ 0.75
CDC42EP1Q00587 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDC42EP1Q00587 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDC42EP1Q00587 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.73■□□□□ 0.75
CDC42EP1Q00587 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDC42EP1Q00587 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDC42EP1Q00587 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.73■□□□□ 0.75
CDC42EP1Q00587 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.73■□□□□ 0.75
CDC42EP1Q00587 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDC42EP1Q00587 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CDC42EP1Q00587 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDC42EP1Q00587 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDC42EP1Q00587 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CDC42EP1Q00587 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.73■□□□□ 0.75
CDC42EP1Q00587 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CDC42EP1Q00587 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDC42EP1Q00587 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.73■□□□□ 0.75
CDC42EP1Q00587 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDC42EP1Q00587 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CDC42EP1Q00587 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDC42EP1Q00587 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.72■□□□□ 0.75
CDC42EP1Q00587 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CDC42EP1Q00587 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDC42EP1Q00587 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.72■□□□□ 0.75
CDC42EP1Q00587 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.72■□□□□ 0.75
CDC42EP1Q00587 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.72■□□□□ 0.75
CDC42EP1Q00587 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.72■□□□□ 0.75
CDC42EP1Q00587 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDC42EP1Q00587 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.72■□□□□ 0.75
CDC42EP1Q00587 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.72■□□□□ 0.75
CDC42EP1Q00587 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.72■□□□□ 0.75
CDC42EP1Q00587 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.72■□□□□ 0.75
CDC42EP1Q00587 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CDC42EP1Q00587 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.72■□□□□ 0.75
CDC42EP1Q00587 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.72■□□□□ 0.75
CDC42EP1Q00587 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDC42EP1Q00587 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDC42EP1Q00587 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.72■□□□□ 0.75
CDC42EP1Q00587 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDC42EP1Q00587 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDC42EP1Q00587 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDC42EP1Q00587 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CDC42EP1Q00587 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDC42EP1Q00587 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDC42EP1Q00587 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDC42EP1Q00587 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.71■□□□□ 0.75
CDC42EP1Q00587 AC096633.1-201ENST00000422446 749 ntBASIC19.71■□□□□ 0.75
CDC42EP1Q00587 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDC42EP1Q00587 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.71■□□□□ 0.75
CDC42EP1Q00587 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.71■□□□□ 0.75
CDC42EP1Q00587 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDC42EP1Q00587 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDC42EP1Q00587 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.71■□□□□ 0.75
CDC42EP1Q00587 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.71■□□□□ 0.75
CDC42EP1Q00587 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.71■□□□□ 0.75
CDC42EP1Q00587 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.71■□□□□ 0.75
CDC42EP1Q00587 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.71■□□□□ 0.75
CDC42EP1Q00587 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.71■□□□□ 0.75
CDC42EP1Q00587 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDC42EP1Q00587 AP000974.1-201ENST00000623909 2387 ntBASIC19.71■□□□□ 0.75
CDC42EP1Q00587 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CDC42EP1Q00587 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDC42EP1Q00587 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.71■□□□□ 0.75
CDC42EP1Q00587 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.71■□□□□ 0.75
CDC42EP1Q00587 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.74
CDC42EP1Q00587 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42EP1Q00587 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42EP1Q00587 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42EP1Q00587 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CDC42EP1Q00587 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42EP1Q00587 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms