Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.87■□□□□ 0.45
CDKL1Q00532 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.87■□□□□ 0.45
CDKL1Q00532 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.87■□□□□ 0.45
CDKL1Q00532 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.87■□□□□ 0.45
CDKL1Q00532 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDKL1Q00532 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
CDKL1Q00532 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CDKL1Q00532 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDKL1Q00532 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDKL1Q00532 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDKL1Q00532 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDKL1Q00532 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDKL1Q00532 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CDKL1Q00532 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CDKL1Q00532 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDKL1Q00532 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDKL1Q00532 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.86■□□□□ 0.45
CDKL1Q00532 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.86■□□□□ 0.45
CDKL1Q00532 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.86■□□□□ 0.45
CDKL1Q00532 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.86■□□□□ 0.45
CDKL1Q00532 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CDKL1Q00532 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CDKL1Q00532 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.86■□□□□ 0.45
CDKL1Q00532 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDKL1Q00532 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDKL1Q00532 TNRC18P3-201ENST00000441896 2691 ntBASIC17.86■□□□□ 0.45
CDKL1Q00532 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CDKL1Q00532 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDKL1Q00532 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDKL1Q00532 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDKL1Q00532 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDKL1Q00532 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.86■□□□□ 0.45
CDKL1Q00532 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDKL1Q00532 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDKL1Q00532 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDKL1Q00532 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.86■□□□□ 0.45
CDKL1Q00532 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDKL1Q00532 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.86■□□□□ 0.45
CDKL1Q00532 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDKL1Q00532 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDKL1Q00532 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDKL1Q00532 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.85■□□□□ 0.45
CDKL1Q00532 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.85■□□□□ 0.45
CDKL1Q00532 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDKL1Q00532 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDKL1Q00532 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CDKL1Q00532 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDKL1Q00532 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDKL1Q00532 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDKL1Q00532 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDKL1Q00532 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.85■□□□□ 0.45
CDKL1Q00532 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDKL1Q00532 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.85■□□□□ 0.45
CDKL1Q00532 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDKL1Q00532 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDKL1Q00532 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.85■□□□□ 0.45
CDKL1Q00532 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.85■□□□□ 0.45
CDKL1Q00532 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CDKL1Q00532 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.85■□□□□ 0.45
CDKL1Q00532 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.85■□□□□ 0.45
CDKL1Q00532 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDKL1Q00532 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDKL1Q00532 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
CDKL1Q00532 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDKL1Q00532 AL138966.2-201ENST00000621997 464 ntBASIC17.85■□□□□ 0.45
CDKL1Q00532 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDKL1Q00532 AC092865.7-201ENST00000641832 219 ntBASIC17.85■□□□□ 0.45
CDKL1Q00532 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CDKL1Q00532 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDKL1Q00532 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.85■□□□□ 0.45
CDKL1Q00532 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDKL1Q00532 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDKL1Q00532 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
CDKL1Q00532 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.84■□□□□ 0.45
CDKL1Q00532 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDKL1Q00532 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.84■□□□□ 0.45
CDKL1Q00532 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.84■□□□□ 0.45
CDKL1Q00532 PHGDH-209ENST00000641074 1780 ntBASIC17.84■□□□□ 0.45
CDKL1Q00532 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.84■□□□□ 0.45
CDKL1Q00532 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDKL1Q00532 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDKL1Q00532 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDKL1Q00532 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDKL1Q00532 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.84■□□□□ 0.45
CDKL1Q00532 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDKL1Q00532 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CDKL1Q00532 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.84■□□□□ 0.45
CDKL1Q00532 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDKL1Q00532 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.84■□□□□ 0.45
CDKL1Q00532 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.84■□□□□ 0.45
CDKL1Q00532 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.84■□□□□ 0.45
CDKL1Q00532 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDKL1Q00532 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.84■□□□□ 0.45
CDKL1Q00532 MIR3917-201ENST00000580971 93 ntBASIC17.84■□□□□ 0.45
CDKL1Q00532 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.84■□□□□ 0.45
CDKL1Q00532 AC024243.1-201ENST00000609234 778 ntBASIC17.84■□□□□ 0.45
CDKL1Q00532 AC141257.4-201ENST00000634557 245 ntBASIC17.84■□□□□ 0.45
CDKL1Q00532 AC136944.6-201ENST00000634818 245 ntBASIC17.84■□□□□ 0.45
CDKL1Q00532 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDKL1Q00532 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms