Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
DEFA3P59666 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
DEFA3P59666 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
DEFA3P59666 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
DEFA3P59666 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.96■□□□□ 0.15
DEFA3P59666 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
DEFA3P59666 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
DEFA3P59666 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
DEFA3P59666 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
DEFA3P59666 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
DEFA3P59666 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
DEFA3P59666 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
DEFA3P59666 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
DEFA3P59666 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
DEFA3P59666 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
DEFA3P59666 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
DEFA3P59666 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
DEFA3P59666 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
DEFA3P59666 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
DEFA3P59666 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC15.95■□□□□ 0.14
DEFA3P59666 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC15.95■□□□□ 0.14
DEFA3P59666 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC15.95■□□□□ 0.14
DEFA3P59666 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
DEFA3P59666 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.95■□□□□ 0.14
DEFA3P59666 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
DEFA3P59666 HYMAI-201ENST00000635591 3347 ntBASIC15.95■□□□□ 0.14
DEFA3P59666 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
DEFA3P59666 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
DEFA3P59666 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
DEFA3P59666 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
DEFA3P59666 LINC02199-201ENST00000506655 2702 ntBASIC15.95■□□□□ 0.14
DEFA3P59666 NT5C3AP1-201ENST00000394500 1012 ntBASIC15.95■□□□□ 0.14
DEFA3P59666 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC15.95■□□□□ 0.14
DEFA3P59666 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
DEFA3P59666 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
DEFA3P59666 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC15.95■□□□□ 0.14
DEFA3P59666 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC15.95■□□□□ 0.14
DEFA3P59666 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC15.95■□□□□ 0.14
DEFA3P59666 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC15.95■□□□□ 0.14
DEFA3P59666 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
DEFA3P59666 AL365209.1-201ENST00000624418 6473 ntBASIC15.95■□□□□ 0.14
DEFA3P59666 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
DEFA3P59666 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
DEFA3P59666 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
DEFA3P59666 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
DEFA3P59666 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
DEFA3P59666 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
DEFA3P59666 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
DEFA3P59666 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
DEFA3P59666 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
DEFA3P59666 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
DEFA3P59666 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
DEFA3P59666 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.95■□□□□ 0.14
DEFA3P59666 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
DEFA3P59666 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.95■□□□□ 0.14
DEFA3P59666 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
DEFA3P59666 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
DEFA3P59666 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
DEFA3P59666 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
DEFA3P59666 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
DEFA3P59666 AC019069.1-201ENST00000610008 1333 ntBASIC15.94■□□□□ 0.14
DEFA3P59666 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.94■□□□□ 0.14
DEFA3P59666 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC15.94■□□□□ 0.14
DEFA3P59666 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
DEFA3P59666 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
DEFA3P59666 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
DEFA3P59666 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.94■□□□□ 0.14
DEFA3P59666 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
DEFA3P59666 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
DEFA3P59666 AGGF1P2-201ENST00000426656 2106 ntBASIC15.94■□□□□ 0.14
DEFA3P59666 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
DEFA3P59666 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
DEFA3P59666 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
DEFA3P59666 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
DEFA3P59666 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC15.94■□□□□ 0.14
DEFA3P59666 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
DEFA3P59666 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.94■□□□□ 0.14
DEFA3P59666 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
DEFA3P59666 AC007326.2-201ENST00000624224 7579 ntBASIC15.94■□□□□ 0.14
DEFA3P59666 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.94■□□□□ 0.14
DEFA3P59666 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
DEFA3P59666 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
DEFA3P59666 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
DEFA3P59666 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
DEFA3P59666 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC15.94■□□□□ 0.14
DEFA3P59666 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.94■□□□□ 0.14
DEFA3P59666 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
DEFA3P59666 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
DEFA3P59666 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
DEFA3P59666 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
DEFA3P59666 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
DEFA3P59666 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.93■□□□□ 0.14
DEFA3P59666 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
DEFA3P59666 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.93■□□□□ 0.14
DEFA3P59666 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
DEFA3P59666 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
DEFA3P59666 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
DEFA3P59666 MIR600HG-201ENST00000449175 5984 ntBASIC15.93■□□□□ 0.14
DEFA3P59666 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
DEFA3P59666 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms