Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CDH6P55285 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.91■□□□□ 0.62
CDH6P55285 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CDH6P55285 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDH6P55285 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.91■□□□□ 0.62
CDH6P55285 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH6P55285 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CDH6P55285 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH6P55285 AP000997.3-201ENST00000623333 2250 ntBASIC18.91■□□□□ 0.62
CDH6P55285 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CDH6P55285 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CDH6P55285 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.91■□□□□ 0.62
CDH6P55285 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH6P55285 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.91■□□□□ 0.62
CDH6P55285 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.9■□□□□ 0.62
CDH6P55285 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.9■□□□□ 0.62
CDH6P55285 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.9■□□□□ 0.62
CDH6P55285 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH6P55285 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.9■□□□□ 0.62
CDH6P55285 AC067852.2-201ENST00000590513 2313 ntBASIC18.9■□□□□ 0.62
CDH6P55285 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH6P55285 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH6P55285 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CDH6P55285 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.9■□□□□ 0.62
CDH6P55285 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH6P55285 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH6P55285 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.9■□□□□ 0.62
CDH6P55285 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH6P55285 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.9■□□□□ 0.62
CDH6P55285 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.9■□□□□ 0.62
CDH6P55285 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CDH6P55285 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.9■□□□□ 0.62
CDH6P55285 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.9■□□□□ 0.62
CDH6P55285 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.9■□□□□ 0.62
CDH6P55285 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.9■□□□□ 0.62
CDH6P55285 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
CDH6P55285 AC140113.3-201ENST00000605663 199 ntBASIC18.9■□□□□ 0.62
CDH6P55285 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.9■□□□□ 0.62
CDH6P55285 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CDH6P55285 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CDH6P55285 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.9■□□□□ 0.62
CDH6P55285 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.9■□□□□ 0.62
CDH6P55285 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CDH6P55285 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH6P55285 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.9■□□□□ 0.62
CDH6P55285 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH6P55285 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CDH6P55285 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH6P55285 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CDH6P55285 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CDH6P55285 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH6P55285 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDH6P55285 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDH6P55285 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH6P55285 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.89■□□□□ 0.61
CDH6P55285 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
CDH6P55285 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CDH6P55285 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH6P55285 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH6P55285 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDH6P55285 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH6P55285 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.89■□□□□ 0.61
CDH6P55285 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.89■□□□□ 0.61
CDH6P55285 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.89■□□□□ 0.61
CDH6P55285 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDH6P55285 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CDH6P55285 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.89■□□□□ 0.61
CDH6P55285 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH6P55285 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.89■□□□□ 0.61
CDH6P55285 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH6P55285 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
CDH6P55285 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH6P55285 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDH6P55285 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH6P55285 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDH6P55285 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CDH6P55285 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH6P55285 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CDH6P55285 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH6P55285 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.88■□□□□ 0.61
CDH6P55285 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDH6P55285 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH6P55285 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH6P55285 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.88■□□□□ 0.61
CDH6P55285 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.88■□□□□ 0.61
CDH6P55285 PVRIG2P-201ENST00000435460 978 ntBASIC18.88■□□□□ 0.61
CDH6P55285 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDH6P55285 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.88■□□□□ 0.61
CDH6P55285 COX11P1-201ENST00000489116 835 ntBASIC18.88■□□□□ 0.61
CDH6P55285 AC034232.1-201ENST00000506026 1064 ntBASIC18.88■□□□□ 0.61
CDH6P55285 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.88■□□□□ 0.61
CDH6P55285 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
CDH6P55285 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.88■□□□□ 0.61
CDH6P55285 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.88■□□□□ 0.61
CDH6P55285 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CDH6P55285 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CDH6P55285 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDH6P55285 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH6P55285 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH6P55285 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms