Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.65■□□□□ 0.58
ITGA8P53708 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ITGA8P53708 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ITGA8P53708 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
ITGA8P53708 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.64■□□□□ 0.58
ITGA8P53708 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.64■□□□□ 0.58
ITGA8P53708 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ITGA8P53708 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ITGA8P53708 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ITGA8P53708 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.64■□□□□ 0.57
ITGA8P53708 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ITGA8P53708 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ITGA8P53708 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
ITGA8P53708 AC098590.1-201ENST00000468126 897 ntBASIC18.64■□□□□ 0.57
ITGA8P53708 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.64■□□□□ 0.57
ITGA8P53708 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ITGA8P53708 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ITGA8P53708 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ITGA8P53708 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ITGA8P53708 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ITGA8P53708 AL135905.2-201ENST00000584934 1404 ntBASIC18.64■□□□□ 0.57
ITGA8P53708 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ITGA8P53708 AC099398.1-201ENST00000567919 2776 ntBASIC18.64■□□□□ 0.57
ITGA8P53708 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ITGA8P53708 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ITGA8P53708 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.63■□□□□ 0.57
ITGA8P53708 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ITGA8P53708 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ITGA8P53708 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ITGA8P53708 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ITGA8P53708 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ITGA8P53708 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
ITGA8P53708 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ITGA8P53708 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ITGA8P53708 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
ITGA8P53708 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ITGA8P53708 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ITGA8P53708 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.63■□□□□ 0.57
ITGA8P53708 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ITGA8P53708 CRYGFP-201ENST00000418459 633 ntBASIC18.63■□□□□ 0.57
ITGA8P53708 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.63■□□□□ 0.57
ITGA8P53708 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.63■□□□□ 0.57
ITGA8P53708 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.63■□□□□ 0.57
ITGA8P53708 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ITGA8P53708 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.63■□□□□ 0.57
ITGA8P53708 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ITGA8P53708 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ITGA8P53708 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
ITGA8P53708 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
ITGA8P53708 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ITGA8P53708 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ITGA8P53708 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ITGA8P53708 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ITGA8P53708 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ITGA8P53708 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ITGA8P53708 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ITGA8P53708 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.62■□□□□ 0.57
ITGA8P53708 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ITGA8P53708 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ITGA8P53708 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.62■□□□□ 0.57
ITGA8P53708 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ITGA8P53708 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ITGA8P53708 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ITGA8P53708 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ITGA8P53708 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ITGA8P53708 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ITGA8P53708 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ITGA8P53708 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.62■□□□□ 0.57
ITGA8P53708 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ITGA8P53708 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ITGA8P53708 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ITGA8P53708 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
ITGA8P53708 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.62■□□□□ 0.57
ITGA8P53708 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.62■□□□□ 0.57
ITGA8P53708 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ITGA8P53708 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ITGA8P53708 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ITGA8P53708 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
ITGA8P53708 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ITGA8P53708 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ITGA8P53708 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ITGA8P53708 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ITGA8P53708 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ITGA8P53708 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ITGA8P53708 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.62■□□□□ 0.57
ITGA8P53708 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ITGA8P53708 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ITGA8P53708 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
ITGA8P53708 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.61■□□□□ 0.57
ITGA8P53708 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ITGA8P53708 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ITGA8P53708 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ITGA8P53708 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
ITGA8P53708 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ITGA8P53708 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ITGA8P53708 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
ITGA8P53708 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.61■□□□□ 0.57
ITGA8P53708 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ITGA8P53708 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.61■□□□□ 0.57
ITGA8P53708 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms