Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
CLTCL1P53675 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC25.85■■□□□ 1.73
CLTCL1P53675 SIGLEC16-201ENST00000599858 1437 ntBASIC25.85■■□□□ 1.73
CLTCL1P53675 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC25.85■■□□□ 1.73
CLTCL1P53675 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
CLTCL1P53675 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC25.85■■□□□ 1.73
CLTCL1P53675 AC073592.3-201ENST00000625118 1834 ntBASIC25.85■■□□□ 1.73
CLTCL1P53675 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CLTCL1P53675 SOD2-201ENST00000337404 991 ntTSL 2 BASIC25.85■■□□□ 1.73
CLTCL1P53675 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CLTCL1P53675 LAGE3P1-201ENST00000425356 484 ntBASIC25.85■■□□□ 1.73
CLTCL1P53675 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC25.85■■□□□ 1.73
CLTCL1P53675 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC25.85■■□□□ 1.73
CLTCL1P53675 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CLTCL1P53675 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
CLTCL1P53675 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
CLTCL1P53675 HLA-J-201ENST00000462773 1622 ntBASIC25.84■■□□□ 1.73
CLTCL1P53675 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC25.84■■□□□ 1.73
CLTCL1P53675 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC25.84■■□□□ 1.73
CLTCL1P53675 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC25.84■■□□□ 1.73
CLTCL1P53675 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
CLTCL1P53675 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CLTCL1P53675 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CLTCL1P53675 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC25.84■■□□□ 1.73
CLTCL1P53675 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CLTCL1P53675 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CLTCL1P53675 SP100-208ENST00000427101 1922 ntTSL 2 BASIC25.84■■□□□ 1.73
CLTCL1P53675 AC148477.5-201ENST00000625164 1645 ntBASIC25.84■■□□□ 1.73
CLTCL1P53675 FABP5-202ENST00000396359 986 ntTSL 5 BASIC25.84■■□□□ 1.73
CLTCL1P53675 BX005266.1-201ENST00000473402 457 ntBASIC25.84■■□□□ 1.73
CLTCL1P53675 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC25.84■■□□□ 1.73
CLTCL1P53675 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC25.83■■□□□ 1.73
CLTCL1P53675 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
CLTCL1P53675 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC25.83■■□□□ 1.73
CLTCL1P53675 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CLTCL1P53675 AC122714.2-201ENST00000502787 707 ntBASIC25.83■■□□□ 1.73
CLTCL1P53675 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC25.83■■□□□ 1.73
CLTCL1P53675 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CLTCL1P53675 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
CLTCL1P53675 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CLTCL1P53675 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
CLTCL1P53675 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
CLTCL1P53675 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
CLTCL1P53675 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.72
CLTCL1P53675 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC25.82■■□□□ 1.72
CLTCL1P53675 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CLTCL1P53675 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CLTCL1P53675 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CLTCL1P53675 MIR1233-2-201ENST00000408138 82 ntBASIC25.82■■□□□ 1.72
CLTCL1P53675 MIR1233-1-201ENST00000408722 82 ntBASIC25.82■■□□□ 1.72
CLTCL1P53675 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CLTCL1P53675 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC25.82■■□□□ 1.72
CLTCL1P53675 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC25.82■■□□□ 1.72
CLTCL1P53675 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC25.82■■□□□ 1.72
CLTCL1P53675 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
CLTCL1P53675 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC25.82■■□□□ 1.72
CLTCL1P53675 PMS2P7-201ENST00000506558 1336 ntBASIC25.82■■□□□ 1.72
CLTCL1P53675 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC25.82■■□□□ 1.72
CLTCL1P53675 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CLTCL1P53675 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
CLTCL1P53675 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
CLTCL1P53675 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC25.82■■□□□ 1.72
CLTCL1P53675 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
CLTCL1P53675 AC073621.1-201ENST00000392730 636 ntBASIC25.81■■□□□ 1.72
CLTCL1P53675 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC25.81■■□□□ 1.72
CLTCL1P53675 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CLTCL1P53675 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CLTCL1P53675 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
CLTCL1P53675 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC25.81■■□□□ 1.72
CLTCL1P53675 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC25.81■■□□□ 1.72
CLTCL1P53675 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC25.81■■□□□ 1.72
CLTCL1P53675 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC25.81■■□□□ 1.72
CLTCL1P53675 ZNF259P1-201ENST00000407656 1365 ntBASIC25.81■■□□□ 1.72
CLTCL1P53675 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CLTCL1P53675 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC25.81■■□□□ 1.72
CLTCL1P53675 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC25.81■■□□□ 1.72
CLTCL1P53675 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC25.81■■□□□ 1.72
CLTCL1P53675 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC25.81■■□□□ 1.72
CLTCL1P53675 AC010327.4-202ENST00000591484 748 ntBASIC25.81■■□□□ 1.72
CLTCL1P53675 AL356488.2-201ENST00000602755 427 ntBASIC25.81■■□□□ 1.72
CLTCL1P53675 FAM197Y3-203ENST00000618346 717 ntBASIC25.81■■□□□ 1.72
CLTCL1P53675 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC25.81■■□□□ 1.72
CLTCL1P53675 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CLTCL1P53675 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CLTCL1P53675 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
CLTCL1P53675 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CLTCL1P53675 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC25.8■■□□□ 1.72
CLTCL1P53675 AC097374.2-201ENST00000618617 1306 ntBASIC25.8■■□□□ 1.72
CLTCL1P53675 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CLTCL1P53675 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
CLTCL1P53675 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC25.8■■□□□ 1.72
CLTCL1P53675 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC25.8■■□□□ 1.72
CLTCL1P53675 ETFA-208ENST00000559602 792 ntTSL 3 BASIC25.8■■□□□ 1.72
CLTCL1P53675 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC25.8■■□□□ 1.72
CLTCL1P53675 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC25.8■■□□□ 1.72
CLTCL1P53675 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
CLTCL1P53675 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC25.8■■□□□ 1.72
CLTCL1P53675 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
CLTCL1P53675 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CLTCL1P53675 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms