Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SLC9A3P48764 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.67■□□□□ 0.26
SLC9A3P48764 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SLC9A3P48764 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
SLC9A3P48764 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC9A3P48764 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.67■□□□□ 0.26
SLC9A3P48764 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SLC9A3P48764 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.67■□□□□ 0.26
SLC9A3P48764 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
SLC9A3P48764 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SLC9A3P48764 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SLC9A3P48764 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.67■□□□□ 0.26
SLC9A3P48764 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.67■□□□□ 0.26
SLC9A3P48764 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SLC9A3P48764 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC9A3P48764 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
SLC9A3P48764 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.67■□□□□ 0.26
SLC9A3P48764 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SLC9A3P48764 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
SLC9A3P48764 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SLC9A3P48764 KRT8P7-201ENST00000533003 1432 ntBASIC16.67■□□□□ 0.26
SLC9A3P48764 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SLC9A3P48764 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC9A3P48764 REXO1L9P-201ENST00000604264 2108 ntBASIC16.67■□□□□ 0.26
SLC9A3P48764 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
SLC9A3P48764 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.67■□□□□ 0.26
SLC9A3P48764 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC9A3P48764 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SLC9A3P48764 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC9A3P48764 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC9A3P48764 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC9A3P48764 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SLC9A3P48764 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.67■□□□□ 0.26
SLC9A3P48764 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC9A3P48764 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC9A3P48764 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC9A3P48764 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.66■□□□□ 0.26
SLC9A3P48764 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC9A3P48764 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC9A3P48764 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC9A3P48764 AC138028.4-201ENST00000564984 1845 ntBASIC16.66■□□□□ 0.26
SLC9A3P48764 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC9A3P48764 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC9A3P48764 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC9A3P48764 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.66■□□□□ 0.26
SLC9A3P48764 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SLC9A3P48764 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC9A3P48764 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SLC9A3P48764 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.66■□□□□ 0.26
SLC9A3P48764 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC9A3P48764 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.66■□□□□ 0.26
SLC9A3P48764 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.66■□□□□ 0.26
SLC9A3P48764 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.66■□□□□ 0.26
SLC9A3P48764 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.66■□□□□ 0.26
SLC9A3P48764 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.66■□□□□ 0.26
SLC9A3P48764 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.66■□□□□ 0.26
SLC9A3P48764 AC026471.5-201ENST00000615068 467 ntBASIC16.66■□□□□ 0.26
SLC9A3P48764 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC9A3P48764 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SLC9A3P48764 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SLC9A3P48764 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC9A3P48764 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC9A3P48764 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC9A3P48764 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SLC9A3P48764 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC9A3P48764 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.66■□□□□ 0.26
SLC9A3P48764 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SLC9A3P48764 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.65■□□□□ 0.26
SLC9A3P48764 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC9A3P48764 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.65■□□□□ 0.26
SLC9A3P48764 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLC9A3P48764 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC9A3P48764 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.65■□□□□ 0.26
SLC9A3P48764 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC9A3P48764 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SLC9A3P48764 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.65■□□□□ 0.26
SLC9A3P48764 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC9A3P48764 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC9A3P48764 HOXB1-202ENST00000577092 1414 ntBASIC16.65■□□□□ 0.26
SLC9A3P48764 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC9A3P48764 SLC25A1P2-201ENST00000430693 912 ntBASIC16.65■□□□□ 0.26
SLC9A3P48764 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLC9A3P48764 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.65■□□□□ 0.26
SLC9A3P48764 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.65■□□□□ 0.26
SLC9A3P48764 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SLC9A3P48764 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC9A3P48764 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
SLC9A3P48764 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.65■□□□□ 0.26
SLC9A3P48764 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.65■□□□□ 0.26
SLC9A3P48764 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLC9A3P48764 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLC9A3P48764 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC9A3P48764 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.65■□□□□ 0.26
SLC9A3P48764 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SLC9A3P48764 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC9A3P48764 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SLC9A3P48764 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
SLC9A3P48764 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
SLC9A3P48764 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
SLC9A3P48764 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms