Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC1A6P48664 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC1A6P48664 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC1A6P48664 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.88■□□□□ 0.45
SLC1A6P48664 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC1A6P48664 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC1A6P48664 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.88■□□□□ 0.45
SLC1A6P48664 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC1A6P48664 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC1A6P48664 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC1A6P48664 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
SLC1A6P48664 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SLC1A6P48664 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.87■□□□□ 0.45
SLC1A6P48664 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SLC1A6P48664 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.87■□□□□ 0.45
SLC1A6P48664 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
SLC1A6P48664 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.87■□□□□ 0.45
SLC1A6P48664 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SLC1A6P48664 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
SLC1A6P48664 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.87■□□□□ 0.45
SLC1A6P48664 AC073195.1-201ENST00000607241 877 ntBASIC17.87■□□□□ 0.45
SLC1A6P48664 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC1A6P48664 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC1A6P48664 AC084018.2-201ENST00000613093 2607 ntBASIC17.87■□□□□ 0.45
SLC1A6P48664 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC1A6P48664 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC1A6P48664 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SLC1A6P48664 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.87■□□□□ 0.45
SLC1A6P48664 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
SLC1A6P48664 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC1A6P48664 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.87■□□□□ 0.45
SLC1A6P48664 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC1A6P48664 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.87■□□□□ 0.45
SLC1A6P48664 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
SLC1A6P48664 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.86■□□□□ 0.45
SLC1A6P48664 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
SLC1A6P48664 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.86■□□□□ 0.45
SLC1A6P48664 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC1A6P48664 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC1A6P48664 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC1A6P48664 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SLC1A6P48664 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC1A6P48664 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC1A6P48664 ESRRAP1-201ENST00000400596 1257 ntBASIC17.86■□□□□ 0.45
SLC1A6P48664 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
SLC1A6P48664 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.86■□□□□ 0.45
SLC1A6P48664 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.86■□□□□ 0.45
SLC1A6P48664 AF186192.3-201ENST00000583427 947 ntBASIC17.86■□□□□ 0.45
SLC1A6P48664 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC1A6P48664 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.86■□□□□ 0.45
SLC1A6P48664 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.86■□□□□ 0.45
SLC1A6P48664 FSCN1P1-201ENST00000568912 1481 ntBASIC17.86■□□□□ 0.45
SLC1A6P48664 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SLC1A6P48664 AC036111.1-201ENST00000533973 1582 ntBASIC17.86■□□□□ 0.45
SLC1A6P48664 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SLC1A6P48664 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SLC1A6P48664 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC1A6P48664 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SLC1A6P48664 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.85■□□□□ 0.45
SLC1A6P48664 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SLC1A6P48664 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC1A6P48664 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC1A6P48664 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC1A6P48664 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC1A6P48664 MESTP1-201ENST00000404287 994 ntBASIC17.85■□□□□ 0.45
SLC1A6P48664 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC1A6P48664 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC1A6P48664 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SLC1A6P48664 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
SLC1A6P48664 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.85■□□□□ 0.45
SLC1A6P48664 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
SLC1A6P48664 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.85■□□□□ 0.45
SLC1A6P48664 AP001094.4-201ENST00000579008 2176 ntBASIC17.85■□□□□ 0.45
SLC1A6P48664 MIR3180-5-201ENST00000583743 153 ntBASIC17.85■□□□□ 0.45
SLC1A6P48664 AC022211.2-201ENST00000585075 2527 ntBASIC17.85■□□□□ 0.45
SLC1A6P48664 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.85■□□□□ 0.45
SLC1A6P48664 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.85■□□□□ 0.45
SLC1A6P48664 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SLC1A6P48664 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC1A6P48664 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
SLC1A6P48664 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC1A6P48664 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SLC1A6P48664 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.85■□□□□ 0.45
SLC1A6P48664 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.84■□□□□ 0.45
SLC1A6P48664 AL355312.1-201ENST00000407115 2176 ntBASIC17.84■□□□□ 0.45
SLC1A6P48664 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC1A6P48664 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
SLC1A6P48664 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.84■□□□□ 0.45
SLC1A6P48664 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SLC1A6P48664 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
SLC1A6P48664 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC1A6P48664 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC1A6P48664 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC1A6P48664 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC1A6P48664 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC1A6P48664 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.84■□□□□ 0.45
SLC1A6P48664 LINC01126-201ENST00000623515 1646 ntBASIC17.84■□□□□ 0.45
SLC1A6P48664 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SLC1A6P48664 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SLC1A6P48664 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms