Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CXCL12P48061 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.01■□□□□ 0.47
CXCL12P48061 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
CXCL12P48061 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.01■□□□□ 0.47
CXCL12P48061 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.01■□□□□ 0.47
CXCL12P48061 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.01■□□□□ 0.47
CXCL12P48061 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CXCL12P48061 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.01■□□□□ 0.47
CXCL12P48061 KRT18P27-201ENST00000427733 1299 ntBASIC18.01■□□□□ 0.47
CXCL12P48061 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.01■□□□□ 0.47
CXCL12P48061 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CXCL12P48061 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CXCL12P48061 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.01■□□□□ 0.47
CXCL12P48061 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CXCL12P48061 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CXCL12P48061 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CXCL12P48061 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18■□□□□ 0.47
CXCL12P48061 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CXCL12P48061 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
CXCL12P48061 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CXCL12P48061 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CXCL12P48061 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CXCL12P48061 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
CXCL12P48061 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CXCL12P48061 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18■□□□□ 0.47
CXCL12P48061 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CXCL12P48061 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18■□□□□ 0.47
CXCL12P48061 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CXCL12P48061 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18■□□□□ 0.47
CXCL12P48061 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18■□□□□ 0.47
CXCL12P48061 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18■□□□□ 0.47
CXCL12P48061 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18■□□□□ 0.47
CXCL12P48061 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18■□□□□ 0.47
CXCL12P48061 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18■□□□□ 0.47
CXCL12P48061 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18■□□□□ 0.47
CXCL12P48061 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
CXCL12P48061 MIR3197-201ENST00000582241 73 ntBASIC18■□□□□ 0.47
CXCL12P48061 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18■□□□□ 0.47
CXCL12P48061 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CXCL12P48061 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18■□□□□ 0.47
CXCL12P48061 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CXCL12P48061 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18■□□□□ 0.47
CXCL12P48061 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CXCL12P48061 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CXCL12P48061 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.99■□□□□ 0.47
CXCL12P48061 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.99■□□□□ 0.47
CXCL12P48061 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CXCL12P48061 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.99■□□□□ 0.47
CXCL12P48061 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.99■□□□□ 0.47
CXCL12P48061 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.99■□□□□ 0.47
CXCL12P48061 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CXCL12P48061 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CXCL12P48061 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CXCL12P48061 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CXCL12P48061 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CXCL12P48061 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CXCL12P48061 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CXCL12P48061 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CXCL12P48061 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.99■□□□□ 0.47
CXCL12P48061 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.99■□□□□ 0.47
CXCL12P48061 AC007967.3-201ENST00000434308 558 ntBASIC17.99■□□□□ 0.47
CXCL12P48061 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.99■□□□□ 0.47
CXCL12P48061 PRYP5-201ENST00000451909 266 ntBASIC17.99■□□□□ 0.47
CXCL12P48061 AC136632.2-201ENST00000512891 861 ntBASIC17.99■□□□□ 0.47
CXCL12P48061 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CXCL12P48061 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.99■□□□□ 0.47
CXCL12P48061 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.99■□□□□ 0.47
CXCL12P48061 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.99■□□□□ 0.47
CXCL12P48061 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.99■□□□□ 0.47
CXCL12P48061 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.99■□□□□ 0.47
CXCL12P48061 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CXCL12P48061 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CXCL12P48061 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.99■□□□□ 0.47
CXCL12P48061 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CXCL12P48061 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CXCL12P48061 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.99■□□□□ 0.47
CXCL12P48061 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CXCL12P48061 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.99■□□□□ 0.47
CXCL12P48061 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CXCL12P48061 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.99■□□□□ 0.47
CXCL12P48061 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.99■□□□□ 0.47
CXCL12P48061 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CXCL12P48061 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CXCL12P48061 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CXCL12P48061 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.98■□□□□ 0.47
CXCL12P48061 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CXCL12P48061 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CXCL12P48061 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.98■□□□□ 0.47
CXCL12P48061 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CXCL12P48061 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CXCL12P48061 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CXCL12P48061 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CXCL12P48061 AC073621.1-201ENST00000392730 636 ntBASIC17.98■□□□□ 0.47
CXCL12P48061 KRT18P2-201ENST00000447938 1258 ntBASIC17.98■□□□□ 0.47
CXCL12P48061 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.98■□□□□ 0.47
CXCL12P48061 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CXCL12P48061 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CXCL12P48061 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.98■□□□□ 0.47
CXCL12P48061 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.98■□□□□ 0.47
CXCL12P48061 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms