Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC22.74■■□□□ 1.23
RFC4P35249 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC22.74■■□□□ 1.23
RFC4P35249 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC22.74■■□□□ 1.23
RFC4P35249 AP006288.1-201ENST00000446065 395 ntBASIC22.74■■□□□ 1.23
RFC4P35249 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC22.74■■□□□ 1.23
RFC4P35249 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC22.74■■□□□ 1.23
RFC4P35249 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC22.74■■□□□ 1.23
RFC4P35249 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC22.74■■□□□ 1.23
RFC4P35249 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC22.74■■□□□ 1.23
RFC4P35249 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC22.74■■□□□ 1.23
RFC4P35249 PGM5P2-202ENST00000637225 1043 ntBASIC22.74■■□□□ 1.23
RFC4P35249 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
RFC4P35249 KRT18P28-201ENST00000453838 1332 ntBASIC22.74■■□□□ 1.23
RFC4P35249 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
RFC4P35249 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
RFC4P35249 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
RFC4P35249 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC22.73■■□□□ 1.23
RFC4P35249 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC22.73■■□□□ 1.23
RFC4P35249 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
RFC4P35249 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
RFC4P35249 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC22.73■■□□□ 1.23
RFC4P35249 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
RFC4P35249 SNCG-201ENST00000348795 684 ntTSL 2 BASIC22.73■■□□□ 1.23
RFC4P35249 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC22.73■■□□□ 1.23
RFC4P35249 SLC4A1APP2-201ENST00000424054 1259 ntBASIC22.73■■□□□ 1.23
RFC4P35249 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC22.73■■□□□ 1.23
RFC4P35249 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RFC4P35249 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC22.73■■□□□ 1.23
RFC4P35249 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
RFC4P35249 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
RFC4P35249 COPE-211ENST00000600932 1144 ntTSL 5 BASIC22.73■■□□□ 1.23
RFC4P35249 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC22.73■■□□□ 1.23
RFC4P35249 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
RFC4P35249 BID-204ENST00000399767 2129 ntTSL 2 BASIC22.73■■□□□ 1.23
RFC4P35249 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC22.73■■□□□ 1.23
RFC4P35249 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC22.73■■□□□ 1.23
RFC4P35249 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RFC4P35249 AL049812.1-201ENST00000432563 2267 ntBASIC22.73■■□□□ 1.23
RFC4P35249 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RFC4P35249 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC22.72■■□□□ 1.23
RFC4P35249 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
RFC4P35249 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC22.72■■□□□ 1.23
RFC4P35249 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC22.72■■□□□ 1.23
RFC4P35249 KRT18P27-201ENST00000427733 1299 ntBASIC22.72■■□□□ 1.23
RFC4P35249 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC22.72■■□□□ 1.23
RFC4P35249 AC007967.3-201ENST00000434308 558 ntBASIC22.72■■□□□ 1.23
RFC4P35249 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC22.72■■□□□ 1.23
RFC4P35249 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
RFC4P35249 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC22.72■■□□□ 1.23
RFC4P35249 SDCCAG3P1-201ENST00000589292 1150 ntBASIC22.72■■□□□ 1.23
RFC4P35249 AC006557.2-201ENST00000592985 1240 ntBASIC22.72■■□□□ 1.23
RFC4P35249 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC22.72■■□□□ 1.23
RFC4P35249 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RFC4P35249 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC22.72■■□□□ 1.23
RFC4P35249 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
RFC4P35249 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
RFC4P35249 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
RFC4P35249 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC22.72■■□□□ 1.23
RFC4P35249 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RFC4P35249 TBC1D3P5-201ENST00000579401 1545 ntBASIC22.72■■□□□ 1.23
RFC4P35249 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
RFC4P35249 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
RFC4P35249 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC22.71■■□□□ 1.23
RFC4P35249 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC22.71■■□□□ 1.23
RFC4P35249 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RFC4P35249 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RFC4P35249 AC108751.1-201ENST00000490852 363 ntBASIC22.71■■□□□ 1.23
RFC4P35249 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RFC4P35249 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RFC4P35249 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC22.71■■□□□ 1.23
RFC4P35249 AC097374.2-201ENST00000618617 1306 ntBASIC22.71■■□□□ 1.23
RFC4P35249 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC22.71■■□□□ 1.23
RFC4P35249 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC22.71■■□□□ 1.23
RFC4P35249 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC22.71■■□□□ 1.23
RFC4P35249 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC22.71■■□□□ 1.23
RFC4P35249 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC22.71■■□□□ 1.23
RFC4P35249 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RFC4P35249 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RFC4P35249 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RFC4P35249 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC22.71■■□□□ 1.23
RFC4P35249 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC22.71■■□□□ 1.23
RFC4P35249 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC22.7■■□□□ 1.23
RFC4P35249 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
RFC4P35249 AL499627.1-201ENST00000569373 2188 ntBASIC22.7■■□□□ 1.23
RFC4P35249 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC22.7■■□□□ 1.23
RFC4P35249 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC22.7■■□□□ 1.22
RFC4P35249 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RFC4P35249 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC22.7■■□□□ 1.22
RFC4P35249 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC22.7■■□□□ 1.22
RFC4P35249 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC22.7■■□□□ 1.22
RFC4P35249 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
RFC4P35249 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
RFC4P35249 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC22.7■■□□□ 1.22
RFC4P35249 KRT18P2-201ENST00000447938 1258 ntBASIC22.7■■□□□ 1.22
RFC4P35249 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC22.7■■□□□ 1.22
RFC4P35249 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC22.7■■□□□ 1.22
RFC4P35249 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
RFC4P35249 ETFA-208ENST00000559602 792 ntTSL 3 BASIC22.7■■□□□ 1.22
RFC4P35249 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC22.7■■□□□ 1.22
RFC4P35249 AC005829.1-201ENST00000570002 483 ntBASIC22.7■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms