Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.1■□□□□ 0.65
MMP8P22894 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
MMP8P22894 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.1■□□□□ 0.65
MMP8P22894 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MMP8P22894 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MMP8P22894 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MMP8P22894 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MMP8P22894 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.1■□□□□ 0.65
MMP8P22894 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.1■□□□□ 0.65
MMP8P22894 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.1■□□□□ 0.65
MMP8P22894 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.1■□□□□ 0.65
MMP8P22894 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.1■□□□□ 0.65
MMP8P22894 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.1■□□□□ 0.65
MMP8P22894 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.1■□□□□ 0.65
MMP8P22894 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.1■□□□□ 0.65
MMP8P22894 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
MMP8P22894 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MMP8P22894 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
MMP8P22894 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MMP8P22894 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MMP8P22894 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MMP8P22894 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MMP8P22894 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.1■□□□□ 0.65
MMP8P22894 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
MMP8P22894 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
MMP8P22894 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MMP8P22894 AC005332.8-201ENST00000622750 2735 ntBASIC19.09■□□□□ 0.65
MMP8P22894 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MMP8P22894 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MMP8P22894 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
MMP8P22894 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MMP8P22894 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MMP8P22894 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MMP8P22894 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MMP8P22894 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
MMP8P22894 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
MMP8P22894 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MMP8P22894 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MMP8P22894 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MMP8P22894 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.09■□□□□ 0.65
MMP8P22894 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MMP8P22894 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.09■□□□□ 0.65
MMP8P22894 HYMAI.1-201ENST00000620949 238 ntBASIC19.09■□□□□ 0.65
MMP8P22894 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MMP8P22894 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.09■□□□□ 0.65
MMP8P22894 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MMP8P22894 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MMP8P22894 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.09■□□□□ 0.65
MMP8P22894 AC134043.2-201ENST00000624206 2238 ntBASIC19.09■□□□□ 0.65
MMP8P22894 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MMP8P22894 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MMP8P22894 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
MMP8P22894 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
MMP8P22894 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
MMP8P22894 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
MMP8P22894 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
MMP8P22894 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.08■□□□□ 0.65
MMP8P22894 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
MMP8P22894 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
MMP8P22894 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
MMP8P22894 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
MMP8P22894 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.08■□□□□ 0.65
MMP8P22894 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MMP8P22894 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.08■□□□□ 0.64
MMP8P22894 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MMP8P22894 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MMP8P22894 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MMP8P22894 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MMP8P22894 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.08■□□□□ 0.64
MMP8P22894 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.08■□□□□ 0.64
MMP8P22894 HBZP1-201ENST00000354915 429 ntBASIC19.08■□□□□ 0.64
MMP8P22894 FAM8A6P-201ENST00000407496 1135 ntBASIC19.08■□□□□ 0.64
MMP8P22894 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
MMP8P22894 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
MMP8P22894 AC063952.2-201ENST00000498792 1227 ntBASIC19.08■□□□□ 0.64
MMP8P22894 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
MMP8P22894 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.08■□□□□ 0.64
MMP8P22894 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.08■□□□□ 0.64
MMP8P22894 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.08■□□□□ 0.64
MMP8P22894 RN7SL850P-201ENST00000579959 291 ntBASIC19.08■□□□□ 0.64
MMP8P22894 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
MMP8P22894 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
MMP8P22894 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.08■□□□□ 0.64
MMP8P22894 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
MMP8P22894 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MMP8P22894 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.08■□□□□ 0.64
MMP8P22894 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MMP8P22894 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.08■□□□□ 0.64
MMP8P22894 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
MMP8P22894 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
MMP8P22894 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
MMP8P22894 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
MMP8P22894 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MMP8P22894 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
MMP8P22894 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MMP8P22894 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
MMP8P22894 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
MMP8P22894 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
MMP8P22894 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
MMP8P22894 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms