Protein–RNA interactions for Protein: P17787

CHRNB2, Neuronal acetylcholine receptor subunit beta-2, humanhuman

Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB2P17787 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNB2P17787 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNB2P17787 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CHRNB2P17787 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.26■□□□□ 0.67
CHRNB2P17787 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CHRNB2P17787 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNB2P17787 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNB2P17787 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.25■□□□□ 0.67
CHRNB2P17787 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNB2P17787 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.25■□□□□ 0.67
CHRNB2P17787 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNB2P17787 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNB2P17787 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.25■□□□□ 0.67
CHRNB2P17787 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNB2P17787 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNB2P17787 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNB2P17787 LTB4R2-202ENST00000528054 3092 ntBASIC19.25■□□□□ 0.67
CHRNB2P17787 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNB2P17787 AL391807.1-203ENST00000604392 2365 ntBASIC19.25■□□□□ 0.67
CHRNB2P17787 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.25■□□□□ 0.67
CHRNB2P17787 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CHRNB2P17787 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.25■□□□□ 0.67
CHRNB2P17787 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNB2P17787 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.25■□□□□ 0.67
CHRNB2P17787 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNB2P17787 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNB2P17787 AC117947.1-201ENST00000427448 529 ntBASIC19.25■□□□□ 0.67
CHRNB2P17787 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.25■□□□□ 0.67
CHRNB2P17787 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNB2P17787 ATP5G1P1-201ENST00000448724 379 ntBASIC19.25■□□□□ 0.67
CHRNB2P17787 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
CHRNB2P17787 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.25■□□□□ 0.67
CHRNB2P17787 YBX1P2-201ENST00000489612 999 ntBASIC19.25■□□□□ 0.67
CHRNB2P17787 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
CHRNB2P17787 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNB2P17787 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
CHRNB2P17787 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNB2P17787 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CHRNB2P17787 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNB2P17787 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.25■□□□□ 0.67
CHRNB2P17787 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.25■□□□□ 0.67
CHRNB2P17787 LINC00602-201ENST00000629776 2065 ntBASIC19.24■□□□□ 0.67
CHRNB2P17787 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.24■□□□□ 0.67
CHRNB2P17787 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNB2P17787 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNB2P17787 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNB2P17787 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
CHRNB2P17787 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.24■□□□□ 0.67
CHRNB2P17787 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.24■□□□□ 0.67
CHRNB2P17787 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNB2P17787 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.24■□□□□ 0.67
CHRNB2P17787 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNB2P17787 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.24■□□□□ 0.67
CHRNB2P17787 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.24■□□□□ 0.67
CHRNB2P17787 BX664615.1-201ENST00000443558 458 ntBASIC19.24■□□□□ 0.67
CHRNB2P17787 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.24■□□□□ 0.67
CHRNB2P17787 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNB2P17787 AC034232.1-201ENST00000506026 1064 ntBASIC19.24■□□□□ 0.67
CHRNB2P17787 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.24■□□□□ 0.67
CHRNB2P17787 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.24■□□□□ 0.67
CHRNB2P17787 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.24■□□□□ 0.67
CHRNB2P17787 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CHRNB2P17787 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.24■□□□□ 0.67
CHRNB2P17787 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNB2P17787 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNB2P17787 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNB2P17787 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNB2P17787 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.24■□□□□ 0.67
CHRNB2P17787 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.24■□□□□ 0.67
CHRNB2P17787 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNB2P17787 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CHRNB2P17787 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.24■□□□□ 0.67
CHRNB2P17787 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CHRNB2P17787 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.24■□□□□ 0.67
CHRNB2P17787 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNB2P17787 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHRNB2P17787 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CHRNB2P17787 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRNB2P17787 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHRNB2P17787 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CHRNB2P17787 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRNB2P17787 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHRNB2P17787 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHRNB2P17787 KRT18P57-201ENST00000443599 1254 ntBASIC19.23■□□□□ 0.67
CHRNB2P17787 AC092597.1-201ENST00000487352 616 ntBASIC19.23■□□□□ 0.67
CHRNB2P17787 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHRNB2P17787 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.23■□□□□ 0.67
CHRNB2P17787 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.23■□□□□ 0.67
CHRNB2P17787 AL031432.5-201ENST00000641059 760 ntBASIC19.23■□□□□ 0.67
CHRNB2P17787 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CHRNB2P17787 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRNB2P17787 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.23■□□□□ 0.67
CHRNB2P17787 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.23■□□□□ 0.67
CHRNB2P17787 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.23■□□□□ 0.67
CHRNB2P17787 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CHRNB2P17787 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CHRNB2P17787 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHRNB2P17787 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.22■□□□□ 0.67
CHRNB2P17787 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CHRNB2P17787 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms