Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AL023284.2-201ENST00000405850 579 ntBASIC17.19■□□□□ 0.34
NCK1P16333 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.19■□□□□ 0.34
NCK1P16333 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
NCK1P16333 AC026366.1-201ENST00000488803 879 ntBASIC17.19■□□□□ 0.34
NCK1P16333 RNA5SP413-201ENST00000516373 109 ntBASIC17.19■□□□□ 0.34
NCK1P16333 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.19■□□□□ 0.34
NCK1P16333 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NCK1P16333 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
NCK1P16333 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
NCK1P16333 SDHAP2-201ENST00000455183 2001 ntBASIC17.19■□□□□ 0.34
NCK1P16333 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NCK1P16333 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
NCK1P16333 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.19■□□□□ 0.34
NCK1P16333 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NCK1P16333 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NCK1P16333 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.19■□□□□ 0.34
NCK1P16333 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NCK1P16333 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NCK1P16333 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.19■□□□□ 0.34
NCK1P16333 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NCK1P16333 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NCK1P16333 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NCK1P16333 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NCK1P16333 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.18■□□□□ 0.34
NCK1P16333 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NCK1P16333 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NCK1P16333 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.18■□□□□ 0.34
NCK1P16333 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NCK1P16333 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NCK1P16333 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.18■□□□□ 0.34
NCK1P16333 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NCK1P16333 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
NCK1P16333 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.18■□□□□ 0.34
NCK1P16333 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.18■□□□□ 0.34
NCK1P16333 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NCK1P16333 GPAT2P1-201ENST00000444924 1672 ntBASIC17.18■□□□□ 0.34
NCK1P16333 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NCK1P16333 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NCK1P16333 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NCK1P16333 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
NCK1P16333 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
NCK1P16333 FAM207BP-201ENST00000447172 505 ntBASIC17.18■□□□□ 0.34
NCK1P16333 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.18■□□□□ 0.34
NCK1P16333 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
NCK1P16333 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NCK1P16333 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
NCK1P16333 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NCK1P16333 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.18■□□□□ 0.34
NCK1P16333 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.18■□□□□ 0.34
NCK1P16333 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NCK1P16333 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
NCK1P16333 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.18■□□□□ 0.34
NCK1P16333 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.18■□□□□ 0.34
NCK1P16333 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NCK1P16333 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NCK1P16333 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
NCK1P16333 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NCK1P16333 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NCK1P16333 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NCK1P16333 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
NCK1P16333 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NCK1P16333 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NCK1P16333 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.17■□□□□ 0.34
NCK1P16333 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
NCK1P16333 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NCK1P16333 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
NCK1P16333 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NCK1P16333 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NCK1P16333 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NCK1P16333 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NCK1P16333 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.17■□□□□ 0.34
NCK1P16333 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NCK1P16333 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
NCK1P16333 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.17■□□□□ 0.34
NCK1P16333 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.17■□□□□ 0.34
NCK1P16333 KSR1P1-201ENST00000446298 240 ntBASIC17.17■□□□□ 0.34
NCK1P16333 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.17■□□□□ 0.34
NCK1P16333 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NCK1P16333 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.17■□□□□ 0.34
NCK1P16333 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.17■□□□□ 0.34
NCK1P16333 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NCK1P16333 AP001094.4-201ENST00000579008 2176 ntBASIC17.17■□□□□ 0.34
NCK1P16333 AC110285.5-201ENST00000611501 352 ntBASIC17.17■□□□□ 0.34
NCK1P16333 CR392000.1-201ENST00000624770 1228 ntBASIC17.17■□□□□ 0.34
NCK1P16333 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NCK1P16333 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
NCK1P16333 AL023806.1-201ENST00000603994 1649 ntBASIC17.17■□□□□ 0.34
NCK1P16333 AC034236.2-201ENST00000606662 1610 ntBASIC17.17■□□□□ 0.34
NCK1P16333 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NCK1P16333 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NCK1P16333 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.16■□□□□ 0.34
NCK1P16333 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.16■□□□□ 0.34
NCK1P16333 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.16■□□□□ 0.34
NCK1P16333 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
NCK1P16333 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
NCK1P16333 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
NCK1P16333 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
NCK1P16333 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
NCK1P16333 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.16■□□□□ 0.34
NCK1P16333 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms