Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AL163051.1-201ENST00000569214 1512 ntBASIC17.72■□□□□ 0.43
PCNAP12004 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCNAP12004 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.72■□□□□ 0.43
PCNAP12004 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCNAP12004 KRT8P7-201ENST00000533003 1432 ntBASIC17.72■□□□□ 0.43
PCNAP12004 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.72■□□□□ 0.43
PCNAP12004 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCNAP12004 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCNAP12004 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCNAP12004 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCNAP12004 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.71■□□□□ 0.43
PCNAP12004 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
PCNAP12004 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PCNAP12004 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCNAP12004 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.71■□□□□ 0.43
PCNAP12004 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
PCNAP12004 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCNAP12004 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PCNAP12004 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
PCNAP12004 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCNAP12004 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCNAP12004 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCNAP12004 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.71■□□□□ 0.43
PCNAP12004 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
PCNAP12004 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.71■□□□□ 0.43
PCNAP12004 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.71■□□□□ 0.43
PCNAP12004 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.71■□□□□ 0.43
PCNAP12004 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.71■□□□□ 0.43
PCNAP12004 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCNAP12004 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
PCNAP12004 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCNAP12004 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCNAP12004 KRT18P22-201ENST00000402024 1347 ntBASIC17.71■□□□□ 0.42
PCNAP12004 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
PCNAP12004 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
PCNAP12004 ESPNP-201ENST00000270691 2015 ntBASIC17.71■□□□□ 0.42
PCNAP12004 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCNAP12004 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PCNAP12004 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCNAP12004 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCNAP12004 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.7■□□□□ 0.42
PCNAP12004 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCNAP12004 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.7■□□□□ 0.42
PCNAP12004 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PCNAP12004 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCNAP12004 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.7■□□□□ 0.42
PCNAP12004 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PCNAP12004 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
PCNAP12004 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCNAP12004 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
PCNAP12004 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.7■□□□□ 0.42
PCNAP12004 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCNAP12004 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.7■□□□□ 0.42
PCNAP12004 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.7■□□□□ 0.42
PCNAP12004 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.7■□□□□ 0.42
PCNAP12004 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCNAP12004 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.7■□□□□ 0.42
PCNAP12004 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.7■□□□□ 0.42
PCNAP12004 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.7■□□□□ 0.42
PCNAP12004 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCNAP12004 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.7■□□□□ 0.42
PCNAP12004 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
PCNAP12004 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCNAP12004 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.7■□□□□ 0.42
PCNAP12004 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.7■□□□□ 0.42
PCNAP12004 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.7■□□□□ 0.42
PCNAP12004 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCNAP12004 AC009102.3-201ENST00000623118 1491 ntBASIC17.69■□□□□ 0.42
PCNAP12004 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.69■□□□□ 0.42
PCNAP12004 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCNAP12004 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCNAP12004 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCNAP12004 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCNAP12004 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCNAP12004 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.69■□□□□ 0.42
PCNAP12004 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCNAP12004 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.69■□□□□ 0.42
PCNAP12004 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCNAP12004 MIR149-201ENST00000384879 89 ntBASIC17.69■□□□□ 0.42
PCNAP12004 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.69■□□□□ 0.42
PCNAP12004 AL512604.3-201ENST00000569583 964 ntBASIC17.69■□□□□ 0.42
PCNAP12004 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.69■□□□□ 0.42
PCNAP12004 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.69■□□□□ 0.42
PCNAP12004 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
PCNAP12004 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCNAP12004 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCNAP12004 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PCNAP12004 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.69■□□□□ 0.42
PCNAP12004 GMCL1P1-201ENST00000463439 1581 ntBASIC17.69■□□□□ 0.42
PCNAP12004 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.69■□□□□ 0.42
PCNAP12004 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.69■□□□□ 0.42
PCNAP12004 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.69■□□□□ 0.42
PCNAP12004 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCNAP12004 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.69■□□□□ 0.42
PCNAP12004 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCNAP12004 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCNAP12004 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCNAP12004 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.69■□□□□ 0.42
PCNAP12004 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCNAP12004 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms