Protein–RNA interactions for Protein: P11686

SFTPC, Pulmonary surfactant-associated protein C, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPCP11686 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SFTPCP11686 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
SFTPCP11686 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.48■□□□□ 0.23
SFTPCP11686 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.48■□□□□ 0.23
SFTPCP11686 MIR770-201ENST00000390219 98 ntBASIC16.48■□□□□ 0.23
SFTPCP11686 MKNK2P1-201ENST00000437526 628 ntBASIC16.48■□□□□ 0.23
SFTPCP11686 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.48■□□□□ 0.23
SFTPCP11686 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SFTPCP11686 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.48■□□□□ 0.23
SFTPCP11686 C20orf181-201ENST00000623918 480 ntBASIC16.48■□□□□ 0.23
SFTPCP11686 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.48■□□□□ 0.23
SFTPCP11686 AL022326.1-202ENST00000641533 845 ntBASIC16.48■□□□□ 0.23
SFTPCP11686 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.48■□□□□ 0.23
SFTPCP11686 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SFTPCP11686 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC16.48■□□□□ 0.23
SFTPCP11686 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.48■□□□□ 0.23
SFTPCP11686 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SFTPCP11686 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SFTPCP11686 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SFTPCP11686 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SFTPCP11686 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SFTPCP11686 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
SFTPCP11686 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SFTPCP11686 AC097374.2-201ENST00000618617 1306 ntBASIC16.47■□□□□ 0.23
SFTPCP11686 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SFTPCP11686 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SFTPCP11686 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.47■□□□□ 0.23
SFTPCP11686 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SFTPCP11686 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.47■□□□□ 0.23
SFTPCP11686 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SFTPCP11686 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
SFTPCP11686 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.47■□□□□ 0.23
SFTPCP11686 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SFTPCP11686 CNN2P11-201ENST00000429351 262 ntBASIC16.47■□□□□ 0.23
SFTPCP11686 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SFTPCP11686 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.47■□□□□ 0.23
SFTPCP11686 MIR4469-201ENST00000583919 79 ntBASIC16.47■□□□□ 0.23
SFTPCP11686 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.47■□□□□ 0.23
SFTPCP11686 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.47■□□□□ 0.23
SFTPCP11686 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SFTPCP11686 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SFTPCP11686 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SFTPCP11686 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SFTPCP11686 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SFTPCP11686 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SFTPCP11686 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SFTPCP11686 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SFTPCP11686 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.47■□□□□ 0.23
SFTPCP11686 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.46■□□□□ 0.23
SFTPCP11686 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SFTPCP11686 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.46■□□□□ 0.23
SFTPCP11686 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SFTPCP11686 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SFTPCP11686 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SFTPCP11686 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.46■□□□□ 0.23
SFTPCP11686 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.46■□□□□ 0.23
SFTPCP11686 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SFTPCP11686 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SFTPCP11686 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.46■□□□□ 0.23
SFTPCP11686 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.46■□□□□ 0.23
SFTPCP11686 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.46■□□□□ 0.23
SFTPCP11686 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.46■□□□□ 0.23
SFTPCP11686 AC108751.1-201ENST00000490852 363 ntBASIC16.46■□□□□ 0.23
SFTPCP11686 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.46■□□□□ 0.23
SFTPCP11686 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.46■□□□□ 0.23
SFTPCP11686 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.46■□□□□ 0.23
SFTPCP11686 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.46■□□□□ 0.23
SFTPCP11686 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.46■□□□□ 0.23
SFTPCP11686 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.46■□□□□ 0.23
SFTPCP11686 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.46■□□□□ 0.23
SFTPCP11686 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SFTPCP11686 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
SFTPCP11686 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SFTPCP11686 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SFTPCP11686 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.46■□□□□ 0.22
SFTPCP11686 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SFTPCP11686 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SFTPCP11686 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
SFTPCP11686 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SFTPCP11686 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SFTPCP11686 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SFTPCP11686 IRX1P1-201ENST00000438849 1838 ntBASIC16.45■□□□□ 0.22
SFTPCP11686 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SFTPCP11686 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SFTPCP11686 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SFTPCP11686 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SFTPCP11686 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SFTPCP11686 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.45■□□□□ 0.22
SFTPCP11686 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC16.45■□□□□ 0.22
SFTPCP11686 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SFTPCP11686 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
SFTPCP11686 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.45■□□□□ 0.22
SFTPCP11686 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.45■□□□□ 0.22
SFTPCP11686 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SFTPCP11686 AC136632.2-201ENST00000512891 861 ntBASIC16.45■□□□□ 0.22
SFTPCP11686 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.45■□□□□ 0.22
SFTPCP11686 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SFTPCP11686 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.45■□□□□ 0.22
SFTPCP11686 AP000867.4-201ENST00000641616 219 ntBASIC16.45■□□□□ 0.22
SFTPCP11686 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms