Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
UBL4AP11441 LINC01023-201ENST00000606054 436 ntBASIC16.82■□□□□ 0.28
UBL4AP11441 AL390961.4-201ENST00000623958 2535 ntBASIC16.82■□□□□ 0.28
UBL4AP11441 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBL4AP11441 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
UBL4AP11441 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.82■□□□□ 0.28
UBL4AP11441 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBL4AP11441 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBL4AP11441 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBL4AP11441 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBL4AP11441 AC135776.1-201ENST00000319817 2481 ntBASIC16.81■□□□□ 0.28
UBL4AP11441 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBL4AP11441 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBL4AP11441 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBL4AP11441 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBL4AP11441 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBL4AP11441 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
UBL4AP11441 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBL4AP11441 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBL4AP11441 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.81■□□□□ 0.28
UBL4AP11441 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBL4AP11441 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.81■□□□□ 0.28
UBL4AP11441 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBL4AP11441 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.81■□□□□ 0.28
UBL4AP11441 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBL4AP11441 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBL4AP11441 ESPNP-201ENST00000270691 2015 ntBASIC16.81■□□□□ 0.28
UBL4AP11441 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.81■□□□□ 0.28
UBL4AP11441 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBL4AP11441 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBL4AP11441 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBL4AP11441 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBL4AP11441 TERF1P1-201ENST00000311003 1181 ntBASIC16.81■□□□□ 0.28
UBL4AP11441 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBL4AP11441 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBL4AP11441 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.81■□□□□ 0.28
UBL4AP11441 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.81■□□□□ 0.28
UBL4AP11441 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.81■□□□□ 0.28
UBL4AP11441 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
UBL4AP11441 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
UBL4AP11441 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBL4AP11441 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.81■□□□□ 0.28
UBL4AP11441 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBL4AP11441 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.81■□□□□ 0.28
UBL4AP11441 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.81■□□□□ 0.28
UBL4AP11441 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
UBL4AP11441 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.81■□□□□ 0.28
UBL4AP11441 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBL4AP11441 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.81■□□□□ 0.28
UBL4AP11441 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.81■□□□□ 0.28
UBL4AP11441 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBL4AP11441 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBL4AP11441 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBL4AP11441 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.8■□□□□ 0.28
UBL4AP11441 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBL4AP11441 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
UBL4AP11441 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBL4AP11441 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBL4AP11441 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBL4AP11441 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBL4AP11441 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
UBL4AP11441 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBL4AP11441 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBL4AP11441 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBL4AP11441 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.8■□□□□ 0.28
UBL4AP11441 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.8■□□□□ 0.28
UBL4AP11441 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.8■□□□□ 0.28
UBL4AP11441 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
UBL4AP11441 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBL4AP11441 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBL4AP11441 MIR3917-201ENST00000580971 93 ntBASIC16.8■□□□□ 0.28
UBL4AP11441 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.8■□□□□ 0.28
UBL4AP11441 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.8■□□□□ 0.28
UBL4AP11441 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.8■□□□□ 0.28
UBL4AP11441 AL023973.1-201ENST00000624619 620 ntBASIC16.8■□□□□ 0.28
UBL4AP11441 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBL4AP11441 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBL4AP11441 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
UBL4AP11441 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.8■□□□□ 0.28
UBL4AP11441 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
UBL4AP11441 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
UBL4AP11441 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBL4AP11441 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBL4AP11441 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBL4AP11441 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.8■□□□□ 0.28
UBL4AP11441 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.8■□□□□ 0.28
UBL4AP11441 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBL4AP11441 AC093677.2-201ENST00000600169 1863 ntBASIC16.8■□□□□ 0.28
UBL4AP11441 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBL4AP11441 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.8■□□□□ 0.28
UBL4AP11441 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.8■□□□□ 0.28
UBL4AP11441 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
UBL4AP11441 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBL4AP11441 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBL4AP11441 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBL4AP11441 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
UBL4AP11441 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.79■□□□□ 0.28
UBL4AP11441 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.79■□□□□ 0.28
UBL4AP11441 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBL4AP11441 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms