Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LAMP1P11279 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LAMP1P11279 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LAMP1P11279 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.23■□□□□ 0.35
LAMP1P11279 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.23■□□□□ 0.35
LAMP1P11279 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
LAMP1P11279 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LAMP1P11279 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LAMP1P11279 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
LAMP1P11279 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
LAMP1P11279 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LAMP1P11279 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LAMP1P11279 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
LAMP1P11279 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
LAMP1P11279 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LAMP1P11279 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.22■□□□□ 0.35
LAMP1P11279 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
LAMP1P11279 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LAMP1P11279 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
LAMP1P11279 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.22■□□□□ 0.35
LAMP1P11279 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.22■□□□□ 0.35
LAMP1P11279 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
LAMP1P11279 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LAMP1P11279 MMP23A-201ENST00000234610 1017 ntBASIC17.22■□□□□ 0.35
LAMP1P11279 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
LAMP1P11279 ECEL1P2-202ENST00000465689 757 ntBASIC17.22■□□□□ 0.35
LAMP1P11279 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.22■□□□□ 0.35
LAMP1P11279 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.22■□□□□ 0.35
LAMP1P11279 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.22■□□□□ 0.35
LAMP1P11279 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.22■□□□□ 0.35
LAMP1P11279 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
LAMP1P11279 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LAMP1P11279 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LAMP1P11279 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
LAMP1P11279 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LAMP1P11279 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.22■□□□□ 0.35
LAMP1P11279 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.22■□□□□ 0.35
LAMP1P11279 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
LAMP1P11279 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LAMP1P11279 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LAMP1P11279 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LAMP1P11279 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LAMP1P11279 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LAMP1P11279 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LAMP1P11279 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LAMP1P11279 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
LAMP1P11279 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LAMP1P11279 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LAMP1P11279 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LAMP1P11279 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
LAMP1P11279 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LAMP1P11279 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.21■□□□□ 0.35
LAMP1P11279 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LAMP1P11279 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
LAMP1P11279 AC006116.8-202ENST00000587620 1550 ntBASIC17.21■□□□□ 0.35
LAMP1P11279 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
LAMP1P11279 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LAMP1P11279 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LAMP1P11279 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LAMP1P11279 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LAMP1P11279 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.21■□□□□ 0.35
LAMP1P11279 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LAMP1P11279 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.21■□□□□ 0.35
LAMP1P11279 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LAMP1P11279 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.21■□□□□ 0.35
LAMP1P11279 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.21■□□□□ 0.35
LAMP1P11279 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.21■□□□□ 0.35
LAMP1P11279 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.21■□□□□ 0.35
LAMP1P11279 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LAMP1P11279 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LAMP1P11279 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LAMP1P11279 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
LAMP1P11279 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LAMP1P11279 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LAMP1P11279 KRT18P55-202ENST00000578578 1546 ntBASIC17.21■□□□□ 0.34
LAMP1P11279 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LAMP1P11279 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LAMP1P11279 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.2■□□□□ 0.34
LAMP1P11279 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LAMP1P11279 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LAMP1P11279 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LAMP1P11279 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
LAMP1P11279 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
LAMP1P11279 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LAMP1P11279 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LAMP1P11279 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
LAMP1P11279 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LAMP1P11279 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.2■□□□□ 0.34
LAMP1P11279 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.2■□□□□ 0.34
LAMP1P11279 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
LAMP1P11279 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.2■□□□□ 0.34
LAMP1P11279 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.2■□□□□ 0.34
LAMP1P11279 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.2■□□□□ 0.34
LAMP1P11279 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.2■□□□□ 0.34
LAMP1P11279 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.2■□□□□ 0.34
LAMP1P11279 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LAMP1P11279 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.2■□□□□ 0.34
LAMP1P11279 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
LAMP1P11279 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LAMP1P11279 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms