Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PF4V1P10720 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PF4V1P10720 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PF4V1P10720 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PF4V1P10720 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC14.4□□□□□ -0.1
PF4V1P10720 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PF4V1P10720 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PF4V1P10720 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PF4V1P10720 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PF4V1P10720 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PF4V1P10720 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PF4V1P10720 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
PF4V1P10720 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
PF4V1P10720 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
PF4V1P10720 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PF4V1P10720 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PF4V1P10720 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
PF4V1P10720 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PF4V1P10720 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PF4V1P10720 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PF4V1P10720 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PF4V1P10720 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
PF4V1P10720 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC14.4□□□□□ -0.1
PF4V1P10720 MIR3652-201ENST00000579335 131 ntBASIC14.4□□□□□ -0.1
PF4V1P10720 MIR3180-4-201ENST00000582223 153 ntBASIC14.4□□□□□ -0.1
PF4V1P10720 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
PF4V1P10720 AC011498.5-201ENST00000592027 486 ntBASIC14.4□□□□□ -0.1
PF4V1P10720 AC092329.2-201ENST00000598402 547 ntBASIC14.4□□□□□ -0.1
PF4V1P10720 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC14.4□□□□□ -0.1
PF4V1P10720 SPEG-225ENST00000617028 815 ntTSL 5 BASIC14.4□□□□□ -0.1
PF4V1P10720 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.4□□□□□ -0.1
PF4V1P10720 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PF4V1P10720 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PF4V1P10720 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PF4V1P10720 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
PF4V1P10720 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PF4V1P10720 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PF4V1P10720 AL163051.1-201ENST00000569214 1512 ntBASIC14.4□□□□□ -0.1
PF4V1P10720 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC14.4□□□□□ -0.1
PF4V1P10720 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PF4V1P10720 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PF4V1P10720 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC14.39□□□□□ -0.11
PF4V1P10720 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PF4V1P10720 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
PF4V1P10720 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
PF4V1P10720 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PF4V1P10720 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
PF4V1P10720 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PF4V1P10720 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
PF4V1P10720 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PF4V1P10720 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PF4V1P10720 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PF4V1P10720 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PF4V1P10720 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PF4V1P10720 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PF4V1P10720 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
PF4V1P10720 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PF4V1P10720 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.39□□□□□ -0.11
PF4V1P10720 TSSC2-201ENST00000450217 709 ntBASIC14.39□□□□□ -0.11
PF4V1P10720 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.39□□□□□ -0.11
PF4V1P10720 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PF4V1P10720 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.39□□□□□ -0.11
PF4V1P10720 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PF4V1P10720 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC14.39□□□□□ -0.11
PF4V1P10720 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.39□□□□□ -0.11
PF4V1P10720 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC14.39□□□□□ -0.11
PF4V1P10720 AL136038.4-201ENST00000603606 1261 ntBASIC14.39□□□□□ -0.11
PF4V1P10720 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PF4V1P10720 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC14.39□□□□□ -0.11
PF4V1P10720 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
PF4V1P10720 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PF4V1P10720 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PF4V1P10720 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PF4V1P10720 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC14.39□□□□□ -0.11
PF4V1P10720 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC14.39□□□□□ -0.11
PF4V1P10720 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC14.39□□□□□ -0.11
PF4V1P10720 AL356309.3-201ENST00000624132 1934 ntBASIC14.39□□□□□ -0.11
PF4V1P10720 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC14.39□□□□□ -0.11
PF4V1P10720 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PF4V1P10720 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PF4V1P10720 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PF4V1P10720 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PF4V1P10720 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PF4V1P10720 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PF4V1P10720 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC14.38□□□□□ -0.11
PF4V1P10720 AC126763.1-201ENST00000552015 2118 ntBASIC14.38□□□□□ -0.11
PF4V1P10720 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC14.38□□□□□ -0.11
PF4V1P10720 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PF4V1P10720 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PF4V1P10720 MIR149-201ENST00000384879 89 ntBASIC14.38□□□□□ -0.11
PF4V1P10720 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC14.38□□□□□ -0.11
PF4V1P10720 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.38□□□□□ -0.11
PF4V1P10720 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
PF4V1P10720 NAA38-203ENST00000575071 553 ntTSL 2 BASIC14.38□□□□□ -0.11
PF4V1P10720 PRR29-207ENST00000580752 458 ntTSL 3 BASIC14.38□□□□□ -0.11
PF4V1P10720 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
PF4V1P10720 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PF4V1P10720 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PF4V1P10720 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
PF4V1P10720 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms