Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
HOXC6P09630 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.45■□□□□ 0.86
HOXC6P09630 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HOXC6P09630 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC20.45■□□□□ 0.86
HOXC6P09630 GPX1P2-201ENST00000429271 606 ntBASIC20.45■□□□□ 0.86
HOXC6P09630 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.45■□□□□ 0.86
HOXC6P09630 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.45■□□□□ 0.86
HOXC6P09630 KRT18P3-201ENST00000451602 1288 ntBASIC20.45■□□□□ 0.86
HOXC6P09630 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.45■□□□□ 0.86
HOXC6P09630 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC20.45■□□□□ 0.86
HOXC6P09630 AC105339.3-201ENST00000560043 636 ntBASIC20.45■□□□□ 0.86
HOXC6P09630 NKAPP1-205ENST00000585790 367 ntBASIC20.45■□□□□ 0.86
HOXC6P09630 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HOXC6P09630 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.45■□□□□ 0.86
HOXC6P09630 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.45■□□□□ 0.86
HOXC6P09630 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
HOXC6P09630 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HOXC6P09630 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
HOXC6P09630 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HOXC6P09630 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
HOXC6P09630 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
HOXC6P09630 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.45■□□□□ 0.86
HOXC6P09630 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.45■□□□□ 0.86
HOXC6P09630 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HOXC6P09630 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
HOXC6P09630 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HOXC6P09630 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.44■□□□□ 0.86
HOXC6P09630 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HOXC6P09630 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.44■□□□□ 0.86
HOXC6P09630 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.44■□□□□ 0.86
HOXC6P09630 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HOXC6P09630 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.44■□□□□ 0.86
HOXC6P09630 AC112698.1-201ENST00000510299 916 ntBASIC20.44■□□□□ 0.86
HOXC6P09630 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.44■□□□□ 0.86
HOXC6P09630 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.44■□□□□ 0.86
HOXC6P09630 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HOXC6P09630 MTDHP4-201ENST00000600287 670 ntBASIC20.44■□□□□ 0.86
HOXC6P09630 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HOXC6P09630 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.44■□□□□ 0.86
HOXC6P09630 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HOXC6P09630 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.44■□□□□ 0.86
HOXC6P09630 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.44■□□□□ 0.86
HOXC6P09630 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
HOXC6P09630 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.43■□□□□ 0.86
HOXC6P09630 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HOXC6P09630 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.43■□□□□ 0.86
HOXC6P09630 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HOXC6P09630 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.43■□□□□ 0.86
HOXC6P09630 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HOXC6P09630 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HOXC6P09630 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.43■□□□□ 0.86
HOXC6P09630 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.43■□□□□ 0.86
HOXC6P09630 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HOXC6P09630 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC20.43■□□□□ 0.86
HOXC6P09630 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.43■□□□□ 0.86
HOXC6P09630 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HOXC6P09630 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.43■□□□□ 0.86
HOXC6P09630 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.43■□□□□ 0.86
HOXC6P09630 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
HOXC6P09630 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.43■□□□□ 0.86
HOXC6P09630 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HOXC6P09630 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.43■□□□□ 0.86
HOXC6P09630 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HOXC6P09630 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.43■□□□□ 0.86
HOXC6P09630 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HOXC6P09630 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HOXC6P09630 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HOXC6P09630 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.43■□□□□ 0.86
HOXC6P09630 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HOXC6P09630 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HOXC6P09630 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HOXC6P09630 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.42■□□□□ 0.86
HOXC6P09630 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
HOXC6P09630 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
HOXC6P09630 YBX2P1-201ENST00000394192 760 ntBASIC20.42■□□□□ 0.86
HOXC6P09630 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC20.42■□□□□ 0.86
HOXC6P09630 GGCT-205ENST00000409436 954 ntTSL 3 BASIC20.42■□□□□ 0.86
HOXC6P09630 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC20.42■□□□□ 0.86
HOXC6P09630 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
HOXC6P09630 AC040169.1-201ENST00000565382 521 ntBASIC20.42■□□□□ 0.86
HOXC6P09630 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HOXC6P09630 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC20.42■□□□□ 0.86
HOXC6P09630 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HOXC6P09630 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
HOXC6P09630 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.42■□□□□ 0.86
HOXC6P09630 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HOXC6P09630 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
HOXC6P09630 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.42■□□□□ 0.86
HOXC6P09630 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HOXC6P09630 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HOXC6P09630 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
HOXC6P09630 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.42■□□□□ 0.86
HOXC6P09630 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HOXC6P09630 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HOXC6P09630 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
HOXC6P09630 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HOXC6P09630 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
HOXC6P09630 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HOXC6P09630 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HOXC6P09630 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms