Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
TIMP1P01033 AL589182.2-201ENST00000619332 1049 ntBASIC19.55■□□□□ 0.72
TIMP1P01033 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.54■□□□□ 0.72
TIMP1P01033 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.54■□□□□ 0.72
TIMP1P01033 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.54■□□□□ 0.72
TIMP1P01033 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TIMP1P01033 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
TIMP1P01033 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TIMP1P01033 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TIMP1P01033 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TIMP1P01033 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TIMP1P01033 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.54■□□□□ 0.72
TIMP1P01033 CALY-203ENST00000368558 825 ntTSL 5 BASIC19.54■□□□□ 0.72
TIMP1P01033 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.54■□□□□ 0.72
TIMP1P01033 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.54■□□□□ 0.72
TIMP1P01033 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TIMP1P01033 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TIMP1P01033 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.54■□□□□ 0.72
TIMP1P01033 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.54■□□□□ 0.72
TIMP1P01033 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.54■□□□□ 0.72
TIMP1P01033 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TIMP1P01033 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.54■□□□□ 0.72
TIMP1P01033 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TIMP1P01033 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.54■□□□□ 0.72
TIMP1P01033 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.54■□□□□ 0.72
TIMP1P01033 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.53■□□□□ 0.72
TIMP1P01033 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TIMP1P01033 ELL2P1-201ENST00000413990 1906 ntBASIC19.53■□□□□ 0.72
TIMP1P01033 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TIMP1P01033 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.53■□□□□ 0.72
TIMP1P01033 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TIMP1P01033 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.53■□□□□ 0.72
TIMP1P01033 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TIMP1P01033 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.53■□□□□ 0.72
TIMP1P01033 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TIMP1P01033 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.53■□□□□ 0.72
TIMP1P01033 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TIMP1P01033 SPDYE21P-201ENST00000413323 827 ntBASIC19.53■□□□□ 0.72
TIMP1P01033 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.53■□□□□ 0.72
TIMP1P01033 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.53■□□□□ 0.72
TIMP1P01033 AC122714.2-201ENST00000502787 707 ntBASIC19.53■□□□□ 0.72
TIMP1P01033 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.53■□□□□ 0.72
TIMP1P01033 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.53■□□□□ 0.72
TIMP1P01033 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TIMP1P01033 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.53■□□□□ 0.72
TIMP1P01033 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TIMP1P01033 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.53■□□□□ 0.72
TIMP1P01033 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TIMP1P01033 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TIMP1P01033 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.53■□□□□ 0.72
TIMP1P01033 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.52■□□□□ 0.72
TIMP1P01033 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
TIMP1P01033 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TIMP1P01033 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.52■□□□□ 0.72
TIMP1P01033 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TIMP1P01033 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
TIMP1P01033 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TIMP1P01033 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TIMP1P01033 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TIMP1P01033 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TIMP1P01033 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC19.52■□□□□ 0.72
TIMP1P01033 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.52■□□□□ 0.72
TIMP1P01033 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TIMP1P01033 VN2R19P-201ENST00000442399 1052 ntBASIC19.52■□□□□ 0.72
TIMP1P01033 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TIMP1P01033 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TIMP1P01033 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
TIMP1P01033 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.52■□□□□ 0.72
TIMP1P01033 AC011467.4-201ENST00000594891 528 ntBASIC19.52■□□□□ 0.72
TIMP1P01033 AC106028.4-201ENST00000614509 607 ntBASIC19.52■□□□□ 0.72
TIMP1P01033 AC004706.3-202ENST00000621574 984 ntBASIC19.52■□□□□ 0.72
TIMP1P01033 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TIMP1P01033 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TIMP1P01033 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.52■□□□□ 0.72
TIMP1P01033 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TIMP1P01033 AL158211.5-201ENST00000623583 2518 ntBASIC19.52■□□□□ 0.71
TIMP1P01033 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.52■□□□□ 0.71
TIMP1P01033 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TIMP1P01033 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
TIMP1P01033 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
TIMP1P01033 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TIMP1P01033 CLDN5-201ENST00000403084 2357 ntBASIC19.51■□□□□ 0.71
TIMP1P01033 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
TIMP1P01033 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TIMP1P01033 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TIMP1P01033 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
TIMP1P01033 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
TIMP1P01033 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TIMP1P01033 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TIMP1P01033 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
TIMP1P01033 AC096633.1-201ENST00000422446 749 ntBASIC19.51■□□□□ 0.71
TIMP1P01033 HCG4B-203ENST00000450128 991 ntBASIC19.51■□□□□ 0.71
TIMP1P01033 CEND1P1-201ENST00000451006 455 ntBASIC19.51■□□□□ 0.71
TIMP1P01033 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.51■□□□□ 0.71
TIMP1P01033 AC018845.2-201ENST00000568326 409 ntBASIC19.51■□□□□ 0.71
TIMP1P01033 AL078644.1-201ENST00000609881 752 ntBASIC19.51■□□□□ 0.71
TIMP1P01033 AL513190.1-201ENST00000621254 727 ntBASIC19.51■□□□□ 0.71
TIMP1P01033 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.51■□□□□ 0.71
TIMP1P01033 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TIMP1P01033 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms