Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
USP1O94782 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
USP1O94782 AC134043.2-201ENST00000624206 2238 ntBASIC18.39■□□□□ 0.54
USP1O94782 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
USP1O94782 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
USP1O94782 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.39■□□□□ 0.54
USP1O94782 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP1O94782 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.39■□□□□ 0.53
USP1O94782 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.39■□□□□ 0.53
USP1O94782 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP1O94782 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP1O94782 TSPY15P-201ENST00000457163 923 ntBASIC18.39■□□□□ 0.53
USP1O94782 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP1O94782 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.39■□□□□ 0.53
USP1O94782 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
USP1O94782 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP1O94782 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.39■□□□□ 0.53
USP1O94782 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP1O94782 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP1O94782 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
USP1O94782 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP1O94782 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP1O94782 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
USP1O94782 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP1O94782 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP1O94782 AC093010.1-201ENST00000473625 1624 ntBASIC18.38■□□□□ 0.53
USP1O94782 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP1O94782 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP1O94782 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP1O94782 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.38■□□□□ 0.53
USP1O94782 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
USP1O94782 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP1O94782 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP1O94782 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP1O94782 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.38■□□□□ 0.53
USP1O94782 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.38■□□□□ 0.53
USP1O94782 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP1O94782 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.38■□□□□ 0.53
USP1O94782 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.38■□□□□ 0.53
USP1O94782 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.38■□□□□ 0.53
USP1O94782 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.38■□□□□ 0.53
USP1O94782 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USP1O94782 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.38■□□□□ 0.53
USP1O94782 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.38■□□□□ 0.53
USP1O94782 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
USP1O94782 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
USP1O94782 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP1O94782 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USP1O94782 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
USP1O94782 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP1O94782 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
USP1O94782 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USP1O94782 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USP1O94782 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.38■□□□□ 0.53
USP1O94782 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP1O94782 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP1O94782 LINC01126-201ENST00000623515 1646 ntBASIC18.38■□□□□ 0.53
USP1O94782 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP1O94782 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USP1O94782 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USP1O94782 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.37■□□□□ 0.53
USP1O94782 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USP1O94782 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USP1O94782 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.37■□□□□ 0.53
USP1O94782 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP1O94782 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP1O94782 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP1O94782 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USP1O94782 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USP1O94782 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
USP1O94782 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP1O94782 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP1O94782 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP1O94782 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP1O94782 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
USP1O94782 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USP1O94782 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP1O94782 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.37■□□□□ 0.53
USP1O94782 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP1O94782 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP1O94782 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP1O94782 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP1O94782 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.37■□□□□ 0.53
USP1O94782 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.37■□□□□ 0.53
USP1O94782 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.37■□□□□ 0.53
USP1O94782 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.37■□□□□ 0.53
USP1O94782 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USP1O94782 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.37■□□□□ 0.53
USP1O94782 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.37■□□□□ 0.53
USP1O94782 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USP1O94782 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.37■□□□□ 0.53
USP1O94782 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.37■□□□□ 0.53
USP1O94782 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP1O94782 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP1O94782 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP1O94782 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
USP1O94782 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.36■□□□□ 0.53
USP1O94782 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP1O94782 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP1O94782 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms