Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
SSSCA1O60232 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SSSCA1O60232 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
SSSCA1O60232 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSSCA1O60232 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSSCA1O60232 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SSSCA1O60232 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC14.84□□□□□ -0.03
SSSCA1O60232 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SSSCA1O60232 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SSSCA1O60232 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSSCA1O60232 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSSCA1O60232 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SSSCA1O60232 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SSSCA1O60232 AC011676.5-201ENST00000624864 2660 ntBASIC14.84□□□□□ -0.03
SSSCA1O60232 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC14.84□□□□□ -0.03
SSSCA1O60232 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSSCA1O60232 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSSCA1O60232 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SSSCA1O60232 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.84□□□□□ -0.03
SSSCA1O60232 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
SSSCA1O60232 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSSCA1O60232 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC14.84□□□□□ -0.03
SSSCA1O60232 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSSCA1O60232 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSSCA1O60232 SLC29A4P1-201ENST00000398760 971 ntBASIC14.84□□□□□ -0.03
SSSCA1O60232 PPP1R14BP2-201ENST00000426284 444 ntBASIC14.84□□□□□ -0.03
SSSCA1O60232 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC14.84□□□□□ -0.03
SSSCA1O60232 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC14.84□□□□□ -0.03
SSSCA1O60232 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC14.84□□□□□ -0.03
SSSCA1O60232 GLRB-205ENST00000512619 728 ntTSL 3 BASIC14.84□□□□□ -0.03
SSSCA1O60232 CFL2-205ENST00000555765 632 ntTSL 2 BASIC14.84□□□□□ -0.03
SSSCA1O60232 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC14.84□□□□□ -0.03
SSSCA1O60232 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSSCA1O60232 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC14.84□□□□□ -0.03
SSSCA1O60232 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SSSCA1O60232 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSSCA1O60232 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
SSSCA1O60232 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
SSSCA1O60232 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC14.84□□□□□ -0.03
SSSCA1O60232 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC14.84□□□□□ -0.03
SSSCA1O60232 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSSCA1O60232 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC14.84□□□□□ -0.03
SSSCA1O60232 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSSCA1O60232 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSSCA1O60232 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SSSCA1O60232 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSSCA1O60232 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSSCA1O60232 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSSCA1O60232 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSSCA1O60232 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SSSCA1O60232 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SSSCA1O60232 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
SSSCA1O60232 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SSSCA1O60232 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
SSSCA1O60232 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
SSSCA1O60232 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC14.83□□□□□ -0.03
SSSCA1O60232 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SSSCA1O60232 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
SSSCA1O60232 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSSCA1O60232 PKD1P5-201ENST00000532415 10291 ntBASIC14.83□□□□□ -0.04
SSSCA1O60232 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSSCA1O60232 ENSA-205ENST00000361532 792 ntTSL 2 BASIC14.83□□□□□ -0.04
SSSCA1O60232 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SSSCA1O60232 CDCA4P2-201ENST00000441182 718 ntBASIC14.83□□□□□ -0.04
SSSCA1O60232 AC026185.1-201ENST00000445748 174 ntBASIC14.83□□□□□ -0.04
SSSCA1O60232 THEM4-205ENST00000489410 643 ntTSL 2 BASIC14.83□□□□□ -0.04
SSSCA1O60232 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SSSCA1O60232 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC14.83□□□□□ -0.04
SSSCA1O60232 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC14.83□□□□□ -0.04
SSSCA1O60232 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC14.83□□□□□ -0.04
SSSCA1O60232 MYC-209ENST00000641252 345 ntBASIC14.83□□□□□ -0.04
SSSCA1O60232 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
SSSCA1O60232 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
SSSCA1O60232 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
SSSCA1O60232 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSSCA1O60232 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SSSCA1O60232 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
SSSCA1O60232 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SSSCA1O60232 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC14.83□□□□□ -0.04
SSSCA1O60232 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC14.83□□□□□ -0.04
SSSCA1O60232 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSSCA1O60232 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSSCA1O60232 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSSCA1O60232 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SSSCA1O60232 AP001094.4-201ENST00000579008 2176 ntBASIC14.83□□□□□ -0.04
SSSCA1O60232 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSSCA1O60232 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SSSCA1O60232 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SSSCA1O60232 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SSSCA1O60232 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSSCA1O60232 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC14.82□□□□□ -0.04
SSSCA1O60232 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSSCA1O60232 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSSCA1O60232 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.82□□□□□ -0.04
SSSCA1O60232 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SSSCA1O60232 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSSCA1O60232 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC14.82□□□□□ -0.04
SSSCA1O60232 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC14.82□□□□□ -0.04
SSSCA1O60232 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SSSCA1O60232 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms