Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SMAD6O43541 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SMAD6O43541 Z69720.1-201ENST00000601483 472 ntBASIC18.31■□□□□ 0.52
SMAD6O43541 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.31■□□□□ 0.52
SMAD6O43541 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMAD6O43541 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMAD6O43541 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMAD6O43541 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
SMAD6O43541 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMAD6O43541 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.31■□□□□ 0.52
SMAD6O43541 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMAD6O43541 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMAD6O43541 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMAD6O43541 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SMAD6O43541 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SMAD6O43541 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMAD6O43541 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMAD6O43541 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SMAD6O43541 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SMAD6O43541 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMAD6O43541 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SMAD6O43541 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.3■□□□□ 0.52
SMAD6O43541 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMAD6O43541 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
SMAD6O43541 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SMAD6O43541 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.3■□□□□ 0.52
SMAD6O43541 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SMAD6O43541 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SMAD6O43541 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMAD6O43541 NSUN5P1-202ENST00000421140 1535 ntBASIC18.3■□□□□ 0.52
SMAD6O43541 NSUN5P2-203ENST00000457352 1529 ntBASIC18.3■□□□□ 0.52
SMAD6O43541 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SMAD6O43541 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMAD6O43541 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SMAD6O43541 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SMAD6O43541 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SMAD6O43541 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.3■□□□□ 0.52
SMAD6O43541 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMAD6O43541 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SMAD6O43541 AL450487.1-201ENST00000426799 995 ntBASIC18.3■□□□□ 0.52
SMAD6O43541 NUS1P1-201ENST00000446295 882 ntBASIC18.3■□□□□ 0.52
SMAD6O43541 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.3■□□□□ 0.52
SMAD6O43541 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.3■□□□□ 0.52
SMAD6O43541 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.3■□□□□ 0.52
SMAD6O43541 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.3■□□□□ 0.52
SMAD6O43541 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.3■□□□□ 0.52
SMAD6O43541 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
SMAD6O43541 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.3■□□□□ 0.52
SMAD6O43541 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.3■□□□□ 0.52
SMAD6O43541 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.3■□□□□ 0.52
SMAD6O43541 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMAD6O43541 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMAD6O43541 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMAD6O43541 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.3■□□□□ 0.52
SMAD6O43541 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
SMAD6O43541 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SMAD6O43541 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
SMAD6O43541 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMAD6O43541 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMAD6O43541 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.29■□□□□ 0.52
SMAD6O43541 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.29■□□□□ 0.52
SMAD6O43541 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
SMAD6O43541 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SMAD6O43541 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SMAD6O43541 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
SMAD6O43541 AC246785.2-201ENST00000432512 513 ntBASIC18.29■□□□□ 0.52
SMAD6O43541 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.29■□□□□ 0.52
SMAD6O43541 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SMAD6O43541 FOSL1P1-201ENST00000511041 816 ntBASIC18.29■□□□□ 0.52
SMAD6O43541 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.29■□□□□ 0.52
SMAD6O43541 AC005336.2-201ENST00000593183 939 ntBASIC18.29■□□□□ 0.52
SMAD6O43541 AC099336.1-202ENST00000602961 463 ntBASIC18.29■□□□□ 0.52
SMAD6O43541 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SMAD6O43541 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.29■□□□□ 0.52
SMAD6O43541 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMAD6O43541 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMAD6O43541 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMAD6O43541 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMAD6O43541 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMAD6O43541 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SMAD6O43541 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.29■□□□□ 0.52
SMAD6O43541 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMAD6O43541 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.28■□□□□ 0.52
SMAD6O43541 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.28■□□□□ 0.52
SMAD6O43541 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.28■□□□□ 0.52
SMAD6O43541 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SMAD6O43541 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.28■□□□□ 0.52
SMAD6O43541 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SMAD6O43541 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.28■□□□□ 0.52
SMAD6O43541 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SMAD6O43541 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SMAD6O43541 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.28■□□□□ 0.52
SMAD6O43541 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SMAD6O43541 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SMAD6O43541 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SMAD6O43541 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SMAD6O43541 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SMAD6O43541 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SMAD6O43541 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SMAD6O43541 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms