Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 AC093010.1-201ENST00000473625 1624 ntBASIC18.71■□□□□ 0.59
COCHO43405 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COCHO43405 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
COCHO43405 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COCHO43405 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
COCHO43405 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.71■□□□□ 0.59
COCHO43405 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COCHO43405 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
COCHO43405 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.71■□□□□ 0.59
COCHO43405 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COCHO43405 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.71■□□□□ 0.59
COCHO43405 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.71■□□□□ 0.59
COCHO43405 AL591684.3-201ENST00000605187 298 ntBASIC18.71■□□□□ 0.59
COCHO43405 REXO1L6P-202ENST00000619970 1078 ntBASIC18.71■□□□□ 0.59
COCHO43405 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
COCHO43405 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COCHO43405 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COCHO43405 AC125634.1-201ENST00000438758 1403 ntBASIC18.71■□□□□ 0.59
COCHO43405 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.71■□□□□ 0.59
COCHO43405 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.71■□□□□ 0.59
COCHO43405 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.71■□□□□ 0.59
COCHO43405 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.71■□□□□ 0.59
COCHO43405 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COCHO43405 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
COCHO43405 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COCHO43405 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
COCHO43405 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
COCHO43405 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
COCHO43405 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.71■□□□□ 0.58
COCHO43405 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
COCHO43405 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.58
COCHO43405 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
COCHO43405 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.7■□□□□ 0.58
COCHO43405 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COCHO43405 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COCHO43405 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
COCHO43405 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COCHO43405 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.7■□□□□ 0.58
COCHO43405 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.7■□□□□ 0.58
COCHO43405 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.7■□□□□ 0.58
COCHO43405 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.7■□□□□ 0.58
COCHO43405 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
COCHO43405 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COCHO43405 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.7■□□□□ 0.58
COCHO43405 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
COCHO43405 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COCHO43405 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
COCHO43405 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
COCHO43405 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
COCHO43405 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
COCHO43405 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COCHO43405 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.69■□□□□ 0.58
COCHO43405 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COCHO43405 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COCHO43405 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COCHO43405 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COCHO43405 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.69■□□□□ 0.58
COCHO43405 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.69■□□□□ 0.58
COCHO43405 KRT8P10-201ENST00000450021 1447 ntBASIC18.69■□□□□ 0.58
COCHO43405 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
COCHO43405 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
COCHO43405 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COCHO43405 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COCHO43405 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COCHO43405 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.69■□□□□ 0.58
COCHO43405 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
COCHO43405 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
COCHO43405 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.69■□□□□ 0.58
COCHO43405 FDX1P1-201ENST00000449115 551 ntBASIC18.69■□□□□ 0.58
COCHO43405 SAPCD2P3-201ENST00000455031 850 ntBASIC18.69■□□□□ 0.58
COCHO43405 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.69■□□□□ 0.58
COCHO43405 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.69■□□□□ 0.58
COCHO43405 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.69■□□□□ 0.58
COCHO43405 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
COCHO43405 AC009533.2-201ENST00000543664 586 ntBASIC18.69■□□□□ 0.58
COCHO43405 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COCHO43405 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
COCHO43405 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.69■□□□□ 0.58
COCHO43405 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COCHO43405 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COCHO43405 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COCHO43405 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COCHO43405 AL138781.2-201ENST00000617896 1843 ntBASIC18.69■□□□□ 0.58
COCHO43405 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COCHO43405 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
COCHO43405 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.69■□□□□ 0.58
COCHO43405 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COCHO43405 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.69■□□□□ 0.58
COCHO43405 AC004408.2-201ENST00000623613 2777 ntBASIC18.69■□□□□ 0.58
COCHO43405 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.69■□□□□ 0.58
COCHO43405 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
COCHO43405 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.69■□□□□ 0.58
COCHO43405 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.68■□□□□ 0.58
COCHO43405 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
COCHO43405 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.68■□□□□ 0.58
COCHO43405 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
COCHO43405 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.68■□□□□ 0.58
COCHO43405 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
COCHO43405 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COCHO43405 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms