Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.47■□□□□ 0.55
RIPK2O43353 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RIPK2O43353 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
RIPK2O43353 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RIPK2O43353 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
RIPK2O43353 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
RIPK2O43353 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RIPK2O43353 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
RIPK2O43353 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RIPK2O43353 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RIPK2O43353 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RIPK2O43353 AL121761.2-201ENST00000598007 1648 ntBASIC18.46■□□□□ 0.55
RIPK2O43353 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.46■□□□□ 0.55
RIPK2O43353 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.46■□□□□ 0.55
RIPK2O43353 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
RIPK2O43353 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RIPK2O43353 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.46■□□□□ 0.55
RIPK2O43353 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
RIPK2O43353 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RIPK2O43353 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.46■□□□□ 0.55
RIPK2O43353 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.46■□□□□ 0.55
RIPK2O43353 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.46■□□□□ 0.55
RIPK2O43353 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.46■□□□□ 0.55
RIPK2O43353 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RIPK2O43353 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RIPK2O43353 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
RIPK2O43353 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RIPK2O43353 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RIPK2O43353 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.46■□□□□ 0.55
RIPK2O43353 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.46■□□□□ 0.55
RIPK2O43353 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RIPK2O43353 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
RIPK2O43353 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.46■□□□□ 0.55
RIPK2O43353 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
RIPK2O43353 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
RIPK2O43353 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RIPK2O43353 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.45■□□□□ 0.54
RIPK2O43353 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RIPK2O43353 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
RIPK2O43353 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
RIPK2O43353 CROCCP2-202ENST00000412962 2773 ntBASIC18.45■□□□□ 0.54
RIPK2O43353 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.45■□□□□ 0.54
RIPK2O43353 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
RIPK2O43353 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RIPK2O43353 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
RIPK2O43353 RNA5SP413-201ENST00000516373 109 ntBASIC18.45■□□□□ 0.54
RIPK2O43353 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
RIPK2O43353 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.45■□□□□ 0.54
RIPK2O43353 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.45■□□□□ 0.54
RIPK2O43353 AP000692.2-201ENST00000608391 879 ntBASIC18.45■□□□□ 0.54
RIPK2O43353 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.45■□□□□ 0.54
RIPK2O43353 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
RIPK2O43353 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RIPK2O43353 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
RIPK2O43353 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
RIPK2O43353 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RIPK2O43353 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RIPK2O43353 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.45■□□□□ 0.54
RIPK2O43353 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RIPK2O43353 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
RIPK2O43353 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RIPK2O43353 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RIPK2O43353 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RIPK2O43353 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RIPK2O43353 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.44■□□□□ 0.54
RIPK2O43353 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RIPK2O43353 AC133963.1-201ENST00000504166 1679 ntBASIC18.44■□□□□ 0.54
RIPK2O43353 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RIPK2O43353 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.44■□□□□ 0.54
RIPK2O43353 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
RIPK2O43353 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.44■□□□□ 0.54
RIPK2O43353 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RIPK2O43353 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RIPK2O43353 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
RIPK2O43353 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RIPK2O43353 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RIPK2O43353 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RIPK2O43353 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RIPK2O43353 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RIPK2O43353 AL353807.1-201ENST00000427475 662 ntBASIC18.44■□□□□ 0.54
RIPK2O43353 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.44■□□□□ 0.54
RIPK2O43353 RN7SL471P-201ENST00000580476 299 ntBASIC18.44■□□□□ 0.54
RIPK2O43353 MIR3180-5-201ENST00000583743 153 ntBASIC18.44■□□□□ 0.54
RIPK2O43353 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.44■□□□□ 0.54
RIPK2O43353 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RIPK2O43353 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RIPK2O43353 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.44■□□□□ 0.54
RIPK2O43353 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RIPK2O43353 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RIPK2O43353 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RIPK2O43353 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
RIPK2O43353 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RIPK2O43353 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RIPK2O43353 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.44■□□□□ 0.54
RIPK2O43353 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
RIPK2O43353 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RIPK2O43353 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RIPK2O43353 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
RIPK2O43353 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RIPK2O43353 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms