Protein–RNA interactions for Protein: O15079

SNPH, Syntaphilin, humanhuman

Predictions only

Length 494 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNPHO15079 AC010181.2-201ENST00000483759 482 ntTSL 3 BASIC17.2■□□□□ 0.34
SNPHO15079 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.2■□□□□ 0.34
SNPHO15079 AL512604.3-201ENST00000569583 964 ntBASIC17.2■□□□□ 0.34
SNPHO15079 MIR4674-201ENST00000582457 87 ntBASIC17.2■□□□□ 0.34
SNPHO15079 AC092953.2-201ENST00000608000 699 ntBASIC17.2■□□□□ 0.34
SNPHO15079 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SNPHO15079 AC092865.7-201ENST00000641832 219 ntBASIC17.2■□□□□ 0.34
SNPHO15079 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNPHO15079 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.2■□□□□ 0.34
SNPHO15079 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNPHO15079 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SNPHO15079 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNPHO15079 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SNPHO15079 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNPHO15079 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SNPHO15079 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.2■□□□□ 0.34
SNPHO15079 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNPHO15079 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNPHO15079 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.2■□□□□ 0.34
SNPHO15079 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNPHO15079 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNPHO15079 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.2■□□□□ 0.34
SNPHO15079 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SNPHO15079 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SNPHO15079 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SNPHO15079 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNPHO15079 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SNPHO15079 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SNPHO15079 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.2■□□□□ 0.34
SNPHO15079 AC124067.4-201ENST00000519691 2379 ntBASIC17.2■□□□□ 0.34
SNPHO15079 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.2■□□□□ 0.34
SNPHO15079 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SNPHO15079 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNPHO15079 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SNPHO15079 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.19■□□□□ 0.34
SNPHO15079 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SNPHO15079 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNPHO15079 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.19■□□□□ 0.34
SNPHO15079 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNPHO15079 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNPHO15079 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNPHO15079 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNPHO15079 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNPHO15079 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
SNPHO15079 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC17.19■□□□□ 0.34
SNPHO15079 KRT18P57-201ENST00000443599 1254 ntBASIC17.19■□□□□ 0.34
SNPHO15079 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC17.19■□□□□ 0.34
SNPHO15079 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.19■□□□□ 0.34
SNPHO15079 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.19■□□□□ 0.34
SNPHO15079 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SNPHO15079 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.19■□□□□ 0.34
SNPHO15079 RN7SL850P-201ENST00000579959 291 ntBASIC17.19■□□□□ 0.34
SNPHO15079 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNPHO15079 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
SNPHO15079 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNPHO15079 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
SNPHO15079 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNPHO15079 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.19■□□□□ 0.34
SNPHO15079 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNPHO15079 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.19■□□□□ 0.34
SNPHO15079 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.19■□□□□ 0.34
SNPHO15079 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SNPHO15079 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.18■□□□□ 0.34
SNPHO15079 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNPHO15079 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNPHO15079 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.18■□□□□ 0.34
SNPHO15079 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNPHO15079 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.18■□□□□ 0.34
SNPHO15079 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SNPHO15079 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNPHO15079 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNPHO15079 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.18■□□□□ 0.34
SNPHO15079 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNPHO15079 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.18■□□□□ 0.34
SNPHO15079 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.18■□□□□ 0.34
SNPHO15079 AC002558.2-201ENST00000572193 673 ntTSL 3 BASIC17.18■□□□□ 0.34
SNPHO15079 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.18■□□□□ 0.34
SNPHO15079 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.18■□□□□ 0.34
SNPHO15079 AC010331.1-201ENST00000611423 582 ntBASIC17.18■□□□□ 0.34
SNPHO15079 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SNPHO15079 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SNPHO15079 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SNPHO15079 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.18■□□□□ 0.34
SNPHO15079 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNPHO15079 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNPHO15079 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.18■□□□□ 0.34
SNPHO15079 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.18■□□□□ 0.34
SNPHO15079 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SNPHO15079 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SNPHO15079 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNPHO15079 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNPHO15079 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNPHO15079 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
SNPHO15079 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.17■□□□□ 0.34
SNPHO15079 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNPHO15079 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SNPHO15079 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SNPHO15079 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNPHO15079 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNPHO15079 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms