Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CASQ2O14958 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.27■□□□□ 0.36
CASQ2O14958 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.27■□□□□ 0.36
CASQ2O14958 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CASQ2O14958 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CASQ2O14958 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.27■□□□□ 0.36
CASQ2O14958 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.27■□□□□ 0.35
CASQ2O14958 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.27■□□□□ 0.35
CASQ2O14958 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CASQ2O14958 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.27■□□□□ 0.35
CASQ2O14958 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CASQ2O14958 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.27■□□□□ 0.35
CASQ2O14958 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CASQ2O14958 AL138688.1-201ENST00000624851 1594 ntBASIC17.27■□□□□ 0.35
CASQ2O14958 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CASQ2O14958 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CASQ2O14958 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CASQ2O14958 KRT18P55-202ENST00000578578 1546 ntBASIC17.26■□□□□ 0.35
CASQ2O14958 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASQ2O14958 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASQ2O14958 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.26■□□□□ 0.35
CASQ2O14958 AC008894.3-201ENST00000624324 3103 ntBASIC17.26■□□□□ 0.35
CASQ2O14958 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASQ2O14958 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASQ2O14958 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CASQ2O14958 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
CASQ2O14958 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASQ2O14958 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASQ2O14958 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CASQ2O14958 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.26■□□□□ 0.35
CASQ2O14958 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CASQ2O14958 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.26■□□□□ 0.35
CASQ2O14958 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.26■□□□□ 0.35
CASQ2O14958 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.26■□□□□ 0.35
CASQ2O14958 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.26■□□□□ 0.35
CASQ2O14958 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.26■□□□□ 0.35
CASQ2O14958 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CASQ2O14958 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CASQ2O14958 AC110285.6-201ENST00000617652 491 ntBASIC17.26■□□□□ 0.35
CASQ2O14958 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASQ2O14958 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASQ2O14958 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CASQ2O14958 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.26■□□□□ 0.35
CASQ2O14958 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CASQ2O14958 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASQ2O14958 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASQ2O14958 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASQ2O14958 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.26■□□□□ 0.35
CASQ2O14958 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CASQ2O14958 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASQ2O14958 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASQ2O14958 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CASQ2O14958 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.26■□□□□ 0.35
CASQ2O14958 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CASQ2O14958 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CASQ2O14958 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.25■□□□□ 0.35
CASQ2O14958 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CASQ2O14958 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CASQ2O14958 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CASQ2O14958 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CASQ2O14958 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CASQ2O14958 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CASQ2O14958 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CASQ2O14958 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CASQ2O14958 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CASQ2O14958 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CASQ2O14958 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CASQ2O14958 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.25■□□□□ 0.35
CASQ2O14958 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CASQ2O14958 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.25■□□□□ 0.35
CASQ2O14958 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CASQ2O14958 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CASQ2O14958 AC010980.2-201ENST00000587099 1412 ntBASIC17.25■□□□□ 0.35
CASQ2O14958 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
CASQ2O14958 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CASQ2O14958 AL390719.1-204ENST00000412397 1219 ntBASIC17.25■□□□□ 0.35
CASQ2O14958 CNN2P6-201ENST00000439038 900 ntBASIC17.25■□□□□ 0.35
CASQ2O14958 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
CASQ2O14958 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.25■□□□□ 0.35
CASQ2O14958 AC005829.2-201ENST00000571422 1056 ntBASIC17.25■□□□□ 0.35
CASQ2O14958 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CASQ2O14958 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CASQ2O14958 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CASQ2O14958 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.25■□□□□ 0.35
CASQ2O14958 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CASQ2O14958 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CASQ2O14958 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CASQ2O14958 AC105020.1-201ENST00000435356 2205 ntBASIC17.25■□□□□ 0.35
CASQ2O14958 PCDH8P1-201ENST00000428983 2773 ntBASIC17.25■□□□□ 0.35
CASQ2O14958 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CASQ2O14958 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CASQ2O14958 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.25■□□□□ 0.35
CASQ2O14958 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CASQ2O14958 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CASQ2O14958 PHGDH-209ENST00000641074 1780 ntBASIC17.25■□□□□ 0.35
CASQ2O14958 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CASQ2O14958 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.24■□□□□ 0.35
CASQ2O14958 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.24■□□□□ 0.35
CASQ2O14958 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CASQ2O14958 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms