Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH17O14917 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDH17O14917 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH17O14917 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH17O14917 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH17O14917 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH17O14917 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH17O14917 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH17O14917 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH17O14917 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
PCDH17O14917 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH17O14917 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDH17O14917 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDH17O14917 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH17O14917 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH17O14917 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH17O14917 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PCDH17O14917 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH17O14917 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH17O14917 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH17O14917 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH17O14917 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH17O14917 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH17O14917 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.35■□□□□ 0.37
PCDH17O14917 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH17O14917 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDH17O14917 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDH17O14917 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
PCDH17O14917 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH17O14917 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PCDH17O14917 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH17O14917 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH17O14917 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH17O14917 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
PCDH17O14917 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH17O14917 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH17O14917 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH17O14917 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.34■□□□□ 0.37
PCDH17O14917 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDH17O14917 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH17O14917 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
PCDH17O14917 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH17O14917 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH17O14917 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH17O14917 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH17O14917 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
PCDH17O14917 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDH17O14917 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PCDH17O14917 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDH17O14917 AL645929.1-201ENST00000420084 975 ntBASIC17.34■□□□□ 0.37
PCDH17O14917 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDH17O14917 PVRIG2P-201ENST00000435460 978 ntBASIC17.34■□□□□ 0.37
PCDH17O14917 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDH17O14917 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH17O14917 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDH17O14917 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.34■□□□□ 0.37
PCDH17O14917 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.34■□□□□ 0.37
PCDH17O14917 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
PCDH17O14917 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
PCDH17O14917 AL136038.4-201ENST00000603606 1261 ntBASIC17.34■□□□□ 0.37
PCDH17O14917 AC069148.1-201ENST00000608741 768 ntBASIC17.34■□□□□ 0.37
PCDH17O14917 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH17O14917 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDH17O14917 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.34■□□□□ 0.37
PCDH17O14917 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PCDH17O14917 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PCDH17O14917 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PCDH17O14917 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH17O14917 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH17O14917 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH17O14917 AL499627.1-201ENST00000569373 2188 ntBASIC17.33■□□□□ 0.37
PCDH17O14917 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PCDH17O14917 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDH17O14917 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
PCDH17O14917 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDH17O14917 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDH17O14917 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
PCDH17O14917 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PCDH17O14917 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.33■□□□□ 0.37
PCDH17O14917 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
PCDH17O14917 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDH17O14917 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDH17O14917 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.33■□□□□ 0.36
PCDH17O14917 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDH17O14917 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
PCDH17O14917 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDH17O14917 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDH17O14917 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDH17O14917 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDH17O14917 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.33■□□□□ 0.36
PCDH17O14917 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PCDH17O14917 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
PCDH17O14917 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDH17O14917 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDH17O14917 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
PCDH17O14917 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.33■□□□□ 0.36
PCDH17O14917 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
PCDH17O14917 AL157888.1-201ENST00000631930 593 ntBASIC17.33■□□□□ 0.36
PCDH17O14917 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.33■□□□□ 0.36
PCDH17O14917 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms