Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC008667.4-201ENST00000607370 168 ntBASIC19.22■□□□□ 0.67
SOX1O00570 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.22■□□□□ 0.67
SOX1O00570 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.22■□□□□ 0.67
SOX1O00570 AC025580.3-201ENST00000617932 1424 ntBASIC19.22■□□□□ 0.67
SOX1O00570 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SOX1O00570 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.22■□□□□ 0.67
SOX1O00570 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SOX1O00570 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.22■□□□□ 0.67
SOX1O00570 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SOX1O00570 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SOX1O00570 Z98044.1-201ENST00000632503 1764 ntBASIC19.21■□□□□ 0.67
SOX1O00570 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SOX1O00570 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SOX1O00570 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SOX1O00570 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.21■□□□□ 0.67
SOX1O00570 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SOX1O00570 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SOX1O00570 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SOX1O00570 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SOX1O00570 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SOX1O00570 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.21■□□□□ 0.67
SOX1O00570 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SOX1O00570 AC096734.2-201ENST00000562054 433 ntBASIC19.21■□□□□ 0.67
SOX1O00570 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.21■□□□□ 0.67
SOX1O00570 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.21■□□□□ 0.67
SOX1O00570 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.21■□□□□ 0.67
SOX1O00570 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
SOX1O00570 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.21■□□□□ 0.67
SOX1O00570 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SOX1O00570 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SOX1O00570 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SOX1O00570 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.21■□□□□ 0.67
SOX1O00570 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SOX1O00570 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SOX1O00570 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.2■□□□□ 0.66
SOX1O00570 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SOX1O00570 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SOX1O00570 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SOX1O00570 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.2■□□□□ 0.66
SOX1O00570 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SOX1O00570 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SOX1O00570 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
SOX1O00570 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SOX1O00570 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.2■□□□□ 0.66
SOX1O00570 MIR943-201ENST00000401286 94 ntBASIC19.2■□□□□ 0.66
SOX1O00570 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SOX1O00570 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC19.2■□□□□ 0.66
SOX1O00570 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC19.2■□□□□ 0.66
SOX1O00570 AL596325.1-201ENST00000563991 1082 ntBASIC19.2■□□□□ 0.66
SOX1O00570 AC051619.7-201ENST00000568314 623 ntBASIC19.2■□□□□ 0.66
SOX1O00570 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.2■□□□□ 0.66
SOX1O00570 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC19.2■□□□□ 0.66
SOX1O00570 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SOX1O00570 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SOX1O00570 AL589182.2-201ENST00000619332 1049 ntBASIC19.2■□□□□ 0.66
SOX1O00570 AL121761.2-201ENST00000598007 1648 ntBASIC19.2■□□□□ 0.66
SOX1O00570 LINC01126-201ENST00000623515 1646 ntBASIC19.2■□□□□ 0.66
SOX1O00570 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SOX1O00570 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.2■□□□□ 0.66
SOX1O00570 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SOX1O00570 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SOX1O00570 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SOX1O00570 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.2■□□□□ 0.66
SOX1O00570 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SOX1O00570 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SOX1O00570 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.2■□□□□ 0.66
SOX1O00570 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
SOX1O00570 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SOX1O00570 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SOX1O00570 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SOX1O00570 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.19■□□□□ 0.66
SOX1O00570 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.19■□□□□ 0.66
SOX1O00570 COX5BP8-201ENST00000416911 349 ntBASIC19.19■□□□□ 0.66
SOX1O00570 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.19■□□□□ 0.66
SOX1O00570 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SOX1O00570 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC19.19■□□□□ 0.66
SOX1O00570 RPS15P9-201ENST00000494093 319 ntBASIC19.19■□□□□ 0.66
SOX1O00570 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SOX1O00570 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.19■□□□□ 0.66
SOX1O00570 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.19■□□□□ 0.66
SOX1O00570 AC009093.7-201ENST00000623853 1223 ntBASIC19.19■□□□□ 0.66
SOX1O00570 AC025048.6-201ENST00000634326 1161 ntBASIC19.19■□□□□ 0.66
SOX1O00570 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
SOX1O00570 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SOX1O00570 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SOX1O00570 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SOX1O00570 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SOX1O00570 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SOX1O00570 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SOX1O00570 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.18■□□□□ 0.66
SOX1O00570 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SOX1O00570 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
SOX1O00570 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.18■□□□□ 0.66
SOX1O00570 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SOX1O00570 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.18■□□□□ 0.66
SOX1O00570 AL391422.3-201ENST00000603791 2761 ntBASIC19.18■□□□□ 0.66
SOX1O00570 TEX21P-204ENST00000641479 1693 ntBASIC19.18■□□□□ 0.66
SOX1O00570 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.18■□□□□ 0.66
SOX1O00570 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SOX1O00570 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms