Protein–RNA interactions for Protein: A6NHL2

TUBAL3, Tubulin alpha chain-like 3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBAL3A6NHL2 AL162741.1-201ENST00000565563 1558 ntBASIC16.33■□□□□ 0.2
TUBAL3A6NHL2 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.33■□□□□ 0.2
TUBAL3A6NHL2 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TUBAL3A6NHL2 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
TUBAL3A6NHL2 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TUBAL3A6NHL2 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.33■□□□□ 0.2
TUBAL3A6NHL2 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
TUBAL3A6NHL2 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TUBAL3A6NHL2 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.33■□□□□ 0.2
TUBAL3A6NHL2 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.32■□□□□ 0.2
TUBAL3A6NHL2 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBAL3A6NHL2 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBAL3A6NHL2 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBAL3A6NHL2 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBAL3A6NHL2 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBAL3A6NHL2 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBAL3A6NHL2 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TUBAL3A6NHL2 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBAL3A6NHL2 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBAL3A6NHL2 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBAL3A6NHL2 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBAL3A6NHL2 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBAL3A6NHL2 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBAL3A6NHL2 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.32■□□□□ 0.2
TUBAL3A6NHL2 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TUBAL3A6NHL2 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TUBAL3A6NHL2 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.32■□□□□ 0.2
TUBAL3A6NHL2 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.32■□□□□ 0.2
TUBAL3A6NHL2 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TUBAL3A6NHL2 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.32■□□□□ 0.2
TUBAL3A6NHL2 KRT8P26-201ENST00000534154 1276 ntBASIC16.32■□□□□ 0.2
TUBAL3A6NHL2 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
TUBAL3A6NHL2 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.32■□□□□ 0.2
TUBAL3A6NHL2 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.32■□□□□ 0.2
TUBAL3A6NHL2 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.32■□□□□ 0.2
TUBAL3A6NHL2 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TUBAL3A6NHL2 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.32■□□□□ 0.2
TUBAL3A6NHL2 AL136038.4-201ENST00000603606 1261 ntBASIC16.32■□□□□ 0.2
TUBAL3A6NHL2 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.32■□□□□ 0.2
TUBAL3A6NHL2 AC016734.2-201ENST00000624325 1377 ntBASIC16.32■□□□□ 0.2
TUBAL3A6NHL2 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.32■□□□□ 0.2
TUBAL3A6NHL2 HCG11-201ENST00000411553 5696 ntBASIC16.32■□□□□ 0.2
TUBAL3A6NHL2 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBAL3A6NHL2 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TUBAL3A6NHL2 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBAL3A6NHL2 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TUBAL3A6NHL2 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBAL3A6NHL2 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
TUBAL3A6NHL2 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.31■□□□□ 0.2
TUBAL3A6NHL2 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TUBAL3A6NHL2 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBAL3A6NHL2 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBAL3A6NHL2 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBAL3A6NHL2 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.31■□□□□ 0.2
TUBAL3A6NHL2 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.31■□□□□ 0.2
TUBAL3A6NHL2 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBAL3A6NHL2 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBAL3A6NHL2 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBAL3A6NHL2 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBAL3A6NHL2 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBAL3A6NHL2 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TUBAL3A6NHL2 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.31■□□□□ 0.2
TUBAL3A6NHL2 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TUBAL3A6NHL2 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.31■□□□□ 0.2
TUBAL3A6NHL2 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.31■□□□□ 0.2
TUBAL3A6NHL2 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TUBAL3A6NHL2 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.31■□□□□ 0.2
TUBAL3A6NHL2 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TUBAL3A6NHL2 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TUBAL3A6NHL2 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBAL3A6NHL2 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBAL3A6NHL2 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.31■□□□□ 0.2
TUBAL3A6NHL2 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
TUBAL3A6NHL2 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.31■□□□□ 0.2
TUBAL3A6NHL2 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.31■□□□□ 0.2
TUBAL3A6NHL2 AC111152.3-201ENST00000569699 673 ntBASIC16.31■□□□□ 0.2
TUBAL3A6NHL2 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.31■□□□□ 0.2
TUBAL3A6NHL2 MIR3917-201ENST00000580971 93 ntBASIC16.31■□□□□ 0.2
TUBAL3A6NHL2 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.31■□□□□ 0.2
TUBAL3A6NHL2 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TUBAL3A6NHL2 AL157888.1-201ENST00000631930 593 ntBASIC16.31■□□□□ 0.2
TUBAL3A6NHL2 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBAL3A6NHL2 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBAL3A6NHL2 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.31■□□□□ 0.2
TUBAL3A6NHL2 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBAL3A6NHL2 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TUBAL3A6NHL2 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TUBAL3A6NHL2 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TUBAL3A6NHL2 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
TUBAL3A6NHL2 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TUBAL3A6NHL2 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TUBAL3A6NHL2 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBAL3A6NHL2 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBAL3A6NHL2 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
TUBAL3A6NHL2 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TUBAL3A6NHL2 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.3■□□□□ 0.2
TUBAL3A6NHL2 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBAL3A6NHL2 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBAL3A6NHL2 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.3■□□□□ 0.2
TUBAL3A6NHL2 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms