Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 MTCL1P1-201ENST00000446207 792 ntBASIC18.06■□□□□ 0.48
TBC1D3FA6NER0 AP002469.2-201ENST00000531724 424 ntBASIC18.06■□□□□ 0.48
TBC1D3FA6NER0 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.06■□□□□ 0.48
TBC1D3FA6NER0 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.06■□□□□ 0.48
TBC1D3FA6NER0 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TBC1D3FA6NER0 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TBC1D3FA6NER0 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TBC1D3FA6NER0 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TBC1D3FA6NER0 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TBC1D3FA6NER0 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.06■□□□□ 0.48
TBC1D3FA6NER0 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.06■□□□□ 0.48
TBC1D3FA6NER0 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TBC1D3FA6NER0 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TBC1D3FA6NER0 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TBC1D3FA6NER0 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TBC1D3FA6NER0 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TBC1D3FA6NER0 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TBC1D3FA6NER0 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.05■□□□□ 0.48
TBC1D3FA6NER0 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TBC1D3FA6NER0 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
TBC1D3FA6NER0 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TBC1D3FA6NER0 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TBC1D3FA6NER0 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TBC1D3FA6NER0 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.05■□□□□ 0.48
TBC1D3FA6NER0 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TBC1D3FA6NER0 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TBC1D3FA6NER0 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
TBC1D3FA6NER0 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.05■□□□□ 0.48
TBC1D3FA6NER0 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.05■□□□□ 0.48
TBC1D3FA6NER0 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.05■□□□□ 0.48
TBC1D3FA6NER0 AC079776.4-201ENST00000511039 504 ntBASIC18.05■□□□□ 0.48
TBC1D3FA6NER0 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.05■□□□□ 0.48
TBC1D3FA6NER0 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.05■□□□□ 0.48
TBC1D3FA6NER0 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
TBC1D3FA6NER0 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TBC1D3FA6NER0 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TBC1D3FA6NER0 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TBC1D3FA6NER0 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TBC1D3FA6NER0 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TBC1D3FA6NER0 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.05■□□□□ 0.48
TBC1D3FA6NER0 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.05■□□□□ 0.48
TBC1D3FA6NER0 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TBC1D3FA6NER0 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TBC1D3FA6NER0 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TBC1D3FA6NER0 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
TBC1D3FA6NER0 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TBC1D3FA6NER0 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TBC1D3FA6NER0 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TBC1D3FA6NER0 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TBC1D3FA6NER0 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.04■□□□□ 0.48
TBC1D3FA6NER0 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TBC1D3FA6NER0 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TBC1D3FA6NER0 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TBC1D3FA6NER0 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TBC1D3FA6NER0 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TBC1D3FA6NER0 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.04■□□□□ 0.48
TBC1D3FA6NER0 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.04■□□□□ 0.48
TBC1D3FA6NER0 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TBC1D3FA6NER0 AF238378.1-201ENST00000526806 358 ntBASIC18.04■□□□□ 0.48
TBC1D3FA6NER0 AL662844.1-201ENST00000546340 181 ntBASIC18.04■□□□□ 0.48
TBC1D3FA6NER0 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.04■□□□□ 0.48
TBC1D3FA6NER0 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.04■□□□□ 0.48
TBC1D3FA6NER0 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.04■□□□□ 0.48
TBC1D3FA6NER0 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TBC1D3FA6NER0 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TBC1D3FA6NER0 AC114341.1-201ENST00000618070 349 ntBASIC18.04■□□□□ 0.48
TBC1D3FA6NER0 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.04■□□□□ 0.48
TBC1D3FA6NER0 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TBC1D3FA6NER0 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.04■□□□□ 0.48
TBC1D3FA6NER0 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
TBC1D3FA6NER0 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TBC1D3FA6NER0 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TBC1D3FA6NER0 GMCL1P1-201ENST00000463439 1581 ntBASIC18.04■□□□□ 0.48
TBC1D3FA6NER0 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
TBC1D3FA6NER0 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TBC1D3FA6NER0 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TBC1D3FA6NER0 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TBC1D3FA6NER0 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.03■□□□□ 0.48
TBC1D3FA6NER0 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.03■□□□□ 0.48
TBC1D3FA6NER0 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.03■□□□□ 0.48
TBC1D3FA6NER0 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TBC1D3FA6NER0 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TBC1D3FA6NER0 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TBC1D3FA6NER0 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TBC1D3FA6NER0 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.03■□□□□ 0.48
TBC1D3FA6NER0 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TBC1D3FA6NER0 RCN1P2-201ENST00000398357 915 ntBASIC18.03■□□□□ 0.48
TBC1D3FA6NER0 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.03■□□□□ 0.48
TBC1D3FA6NER0 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TBC1D3FA6NER0 AC132008.2-207ENST00000454517 770 ntBASIC18.03■□□□□ 0.48
TBC1D3FA6NER0 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.03■□□□□ 0.48
TBC1D3FA6NER0 AC005336.2-201ENST00000593183 939 ntBASIC18.03■□□□□ 0.48
TBC1D3FA6NER0 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TBC1D3FA6NER0 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.03■□□□□ 0.48
TBC1D3FA6NER0 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.03■□□□□ 0.48
TBC1D3FA6NER0 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TBC1D3FA6NER0 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TBC1D3FA6NER0 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TBC1D3FA6NER0 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TBC1D3FA6NER0 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms