Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
HFM1A2PYH4 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC26.75■■□□□ 1.87
HFM1A2PYH4 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
HFM1A2PYH4 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC26.75■■□□□ 1.87
HFM1A2PYH4 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
HFM1A2PYH4 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC26.75■■□□□ 1.87
HFM1A2PYH4 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC26.75■■□□□ 1.87
HFM1A2PYH4 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC26.75■■□□□ 1.87
HFM1A2PYH4 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
HFM1A2PYH4 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC26.74■■□□□ 1.87
HFM1A2PYH4 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
HFM1A2PYH4 RCN1P2-201ENST00000398357 915 ntBASIC26.74■■□□□ 1.87
HFM1A2PYH4 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
HFM1A2PYH4 AC079781.3-201ENST00000449110 356 ntBASIC26.74■■□□□ 1.87
HFM1A2PYH4 SAPCD2P3-201ENST00000455031 850 ntBASIC26.74■■□□□ 1.87
HFM1A2PYH4 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC26.74■■□□□ 1.87
HFM1A2PYH4 AL031008.1-201ENST00000619963 541 ntBASIC26.74■■□□□ 1.87
HFM1A2PYH4 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
HFM1A2PYH4 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC26.74■■□□□ 1.87
HFM1A2PYH4 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC26.74■■□□□ 1.87
HFM1A2PYH4 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
HFM1A2PYH4 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
HFM1A2PYH4 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
HFM1A2PYH4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC26.74■■□□□ 1.87
HFM1A2PYH4 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
HFM1A2PYH4 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
HFM1A2PYH4 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC26.74■■□□□ 1.87
HFM1A2PYH4 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
HFM1A2PYH4 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC26.74■■□□□ 1.87
HFM1A2PYH4 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
HFM1A2PYH4 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC26.73■■□□□ 1.87
HFM1A2PYH4 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC26.73■■□□□ 1.87
HFM1A2PYH4 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC26.73■■□□□ 1.87
HFM1A2PYH4 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
HFM1A2PYH4 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC26.73■■□□□ 1.87
HFM1A2PYH4 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC26.73■■□□□ 1.87
HFM1A2PYH4 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC26.73■■□□□ 1.87
HFM1A2PYH4 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC26.73■■□□□ 1.87
HFM1A2PYH4 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
HFM1A2PYH4 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC26.73■■□□□ 1.87
HFM1A2PYH4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
HFM1A2PYH4 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
HFM1A2PYH4 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC26.73■■□□□ 1.87
HFM1A2PYH4 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC26.73■■□□□ 1.87
HFM1A2PYH4 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
HFM1A2PYH4 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
HFM1A2PYH4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
HFM1A2PYH4 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
HFM1A2PYH4 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC26.73■■□□□ 1.87
HFM1A2PYH4 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
HFM1A2PYH4 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
HFM1A2PYH4 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
HFM1A2PYH4 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
HFM1A2PYH4 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC26.73■■□□□ 1.87
HFM1A2PYH4 FDX1P1-201ENST00000449115 551 ntBASIC26.73■■□□□ 1.87
HFM1A2PYH4 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC26.73■■□□□ 1.87
HFM1A2PYH4 GZMM-202ENST00000592501 941 ntTSL 3 BASIC26.73■■□□□ 1.87
HFM1A2PYH4 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
HFM1A2PYH4 AC104692.2-201ENST00000603054 253 ntBASIC26.73■■□□□ 1.87
HFM1A2PYH4 AC097374.2-201ENST00000618617 1306 ntBASIC26.72■■□□□ 1.87
HFM1A2PYH4 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC26.72■■□□□ 1.87
HFM1A2PYH4 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
HFM1A2PYH4 REXO1L9P-201ENST00000604264 2108 ntBASIC26.72■■□□□ 1.87
HFM1A2PYH4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
HFM1A2PYH4 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC26.72■■□□□ 1.87
HFM1A2PYH4 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
HFM1A2PYH4 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC26.72■■□□□ 1.87
HFM1A2PYH4 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC26.72■■□□□ 1.87
HFM1A2PYH4 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
HFM1A2PYH4 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
HFM1A2PYH4 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
HFM1A2PYH4 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
HFM1A2PYH4 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC26.72■■□□□ 1.87
HFM1A2PYH4 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC26.72■■□□□ 1.87
HFM1A2PYH4 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
HFM1A2PYH4 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
HFM1A2PYH4 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC26.72■■□□□ 1.87
HFM1A2PYH4 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC26.71■■□□□ 1.87
HFM1A2PYH4 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
HFM1A2PYH4 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
HFM1A2PYH4 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC26.71■■□□□ 1.87
HFM1A2PYH4 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
HFM1A2PYH4 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
HFM1A2PYH4 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC26.71■■□□□ 1.87
HFM1A2PYH4 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
HFM1A2PYH4 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
HFM1A2PYH4 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
HFM1A2PYH4 AC004870.1-201ENST00000315132 882 ntBASIC26.71■■□□□ 1.87
HFM1A2PYH4 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
HFM1A2PYH4 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
HFM1A2PYH4 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC26.71■■□□□ 1.87
HFM1A2PYH4 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC26.71■■□□□ 1.87
HFM1A2PYH4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC26.71■■□□□ 1.87
HFM1A2PYH4 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC26.71■■□□□ 1.87
HFM1A2PYH4 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC26.71■■□□□ 1.87
HFM1A2PYH4 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC26.71■■□□□ 1.87
HFM1A2PYH4 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC26.71■■□□□ 1.87
HFM1A2PYH4 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC26.71■■□□□ 1.87
HFM1A2PYH4 MED29-202ENST00000594368 1471 ntTSL 2 BASIC26.71■■□□□ 1.87
HFM1A2PYH4 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms