Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.16■□□□□ 0.34
CCDC187A0A096LP49 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC187A0A096LP49 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CCDC187A0A096LP49 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC187A0A096LP49 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC187A0A096LP49 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC187A0A096LP49 MED15P5-201ENST00000423150 992 ntBASIC17.16■□□□□ 0.34
CCDC187A0A096LP49 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.16■□□□□ 0.34
CCDC187A0A096LP49 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC187A0A096LP49 AL591424.1-201ENST00000442569 1213 ntBASIC17.16■□□□□ 0.34
CCDC187A0A096LP49 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC187A0A096LP49 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC187A0A096LP49 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.16■□□□□ 0.34
CCDC187A0A096LP49 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC187A0A096LP49 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC187A0A096LP49 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC187A0A096LP49 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC187A0A096LP49 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC187A0A096LP49 AL161938.1-201ENST00000569833 2180 ntBASIC17.16■□□□□ 0.34
CCDC187A0A096LP49 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC187A0A096LP49 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.16■□□□□ 0.34
CCDC187A0A096LP49 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC187A0A096LP49 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC187A0A096LP49 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC187A0A096LP49 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC187A0A096LP49 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC187A0A096LP49 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC187A0A096LP49 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC187A0A096LP49 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC187A0A096LP49 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC187A0A096LP49 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC187A0A096LP49 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CCDC187A0A096LP49 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CCDC187A0A096LP49 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC187A0A096LP49 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC187A0A096LP49 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC187A0A096LP49 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC187A0A096LP49 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC187A0A096LP49 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC187A0A096LP49 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC187A0A096LP49 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC187A0A096LP49 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC187A0A096LP49 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC187A0A096LP49 AC098831.1-202ENST00000438821 336 ntBASIC17.15■□□□□ 0.34
CCDC187A0A096LP49 AC092910.1-201ENST00000482027 1129 ntBASIC17.15■□□□□ 0.34
CCDC187A0A096LP49 PGAM5P1-201ENST00000518923 814 ntBASIC17.15■□□□□ 0.34
CCDC187A0A096LP49 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC187A0A096LP49 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.15■□□□□ 0.34
CCDC187A0A096LP49 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC187A0A096LP49 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC187A0A096LP49 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC187A0A096LP49 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC187A0A096LP49 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC187A0A096LP49 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
CCDC187A0A096LP49 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC187A0A096LP49 AC099343.3-201ENST00000605834 2503 ntBASIC17.15■□□□□ 0.34
CCDC187A0A096LP49 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC187A0A096LP49 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC187A0A096LP49 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC187A0A096LP49 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
CCDC187A0A096LP49 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CCDC187A0A096LP49 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC187A0A096LP49 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC187A0A096LP49 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC187A0A096LP49 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC187A0A096LP49 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CCDC187A0A096LP49 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC187A0A096LP49 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CCDC187A0A096LP49 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC187A0A096LP49 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC187A0A096LP49 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.14■□□□□ 0.33
CCDC187A0A096LP49 AC005104.2-201ENST00000427818 678 ntBASIC17.14■□□□□ 0.33
CCDC187A0A096LP49 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC187A0A096LP49 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC187A0A096LP49 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.14■□□□□ 0.33
CCDC187A0A096LP49 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.14■□□□□ 0.33
CCDC187A0A096LP49 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC187A0A096LP49 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC187A0A096LP49 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC187A0A096LP49 AC140113.2-201ENST00000604370 208 ntBASIC17.14■□□□□ 0.33
CCDC187A0A096LP49 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC187A0A096LP49 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.14■□□□□ 0.33
CCDC187A0A096LP49 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC187A0A096LP49 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.14■□□□□ 0.33
CCDC187A0A096LP49 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.14■□□□□ 0.33
CCDC187A0A096LP49 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.14■□□□□ 0.33
CCDC187A0A096LP49 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC187A0A096LP49 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC187A0A096LP49 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CCDC187A0A096LP49 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC187A0A096LP49 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
CCDC187A0A096LP49 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CCDC187A0A096LP49 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.14■□□□□ 0.33
CCDC187A0A096LP49 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC187A0A096LP49 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC187A0A096LP49 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC187A0A096LP49 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC187A0A096LP49 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC187A0A096LP49 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC187A0A096LP49 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms