Protein–RNA interactions for Protein: A0A075B6P5

IGKV2-28, Immunoglobulin kappa variable 2-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28A0A075B6P5 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
IGKV2-28A0A075B6P5 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
IGKV2-28A0A075B6P5 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
IGKV2-28A0A075B6P5 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC12.04□□□□□ -0.48
IGKV2-28A0A075B6P5 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
IGKV2-28A0A075B6P5 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC12.04□□□□□ -0.48
IGKV2-28A0A075B6P5 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
IGKV2-28A0A075B6P5 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
IGKV2-28A0A075B6P5 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC12.04□□□□□ -0.48
IGKV2-28A0A075B6P5 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
IGKV2-28A0A075B6P5 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
IGKV2-28A0A075B6P5 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
IGKV2-28A0A075B6P5 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
IGKV2-28A0A075B6P5 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
IGKV2-28A0A075B6P5 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC12.03□□□□□ -0.48
IGKV2-28A0A075B6P5 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
IGKV2-28A0A075B6P5 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
IGKV2-28A0A075B6P5 AL096828.2-201ENST00000567259 1965 ntBASIC12.03□□□□□ -0.48
IGKV2-28A0A075B6P5 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
IGKV2-28A0A075B6P5 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
IGKV2-28A0A075B6P5 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
IGKV2-28A0A075B6P5 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC12.03□□□□□ -0.48
IGKV2-28A0A075B6P5 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
IGKV2-28A0A075B6P5 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC12.03□□□□□ -0.48
IGKV2-28A0A075B6P5 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
IGKV2-28A0A075B6P5 OVCH1-AS1-204ENST00000641955 5529 ntBASIC12.03□□□□□ -0.48
IGKV2-28A0A075B6P5 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
IGKV2-28A0A075B6P5 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
IGKV2-28A0A075B6P5 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
IGKV2-28A0A075B6P5 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
IGKV2-28A0A075B6P5 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
IGKV2-28A0A075B6P5 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
IGKV2-28A0A075B6P5 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC12.03□□□□□ -0.48
IGKV2-28A0A075B6P5 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
IGKV2-28A0A075B6P5 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
IGKV2-28A0A075B6P5 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
IGKV2-28A0A075B6P5 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
IGKV2-28A0A075B6P5 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
IGKV2-28A0A075B6P5 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC12.03□□□□□ -0.48
IGKV2-28A0A075B6P5 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
IGKV2-28A0A075B6P5 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC12.03□□□□□ -0.48
IGKV2-28A0A075B6P5 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC12.03□□□□□ -0.48
IGKV2-28A0A075B6P5 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC12.03□□□□□ -0.48
IGKV2-28A0A075B6P5 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
IGKV2-28A0A075B6P5 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
IGKV2-28A0A075B6P5 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
IGKV2-28A0A075B6P5 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
IGKV2-28A0A075B6P5 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
IGKV2-28A0A075B6P5 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
IGKV2-28A0A075B6P5 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
IGKV2-28A0A075B6P5 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
IGKV2-28A0A075B6P5 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
IGKV2-28A0A075B6P5 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
IGKV2-28A0A075B6P5 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC12.03□□□□□ -0.48
IGKV2-28A0A075B6P5 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC12.03□□□□□ -0.48
IGKV2-28A0A075B6P5 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
IGKV2-28A0A075B6P5 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
IGKV2-28A0A075B6P5 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC12.03□□□□□ -0.48
IGKV2-28A0A075B6P5 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC12.03□□□□□ -0.48
IGKV2-28A0A075B6P5 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
IGKV2-28A0A075B6P5 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC12.02□□□□□ -0.48
IGKV2-28A0A075B6P5 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
IGKV2-28A0A075B6P5 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
IGKV2-28A0A075B6P5 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
IGKV2-28A0A075B6P5 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
IGKV2-28A0A075B6P5 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
IGKV2-28A0A075B6P5 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
IGKV2-28A0A075B6P5 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
IGKV2-28A0A075B6P5 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
IGKV2-28A0A075B6P5 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
IGKV2-28A0A075B6P5 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
IGKV2-28A0A075B6P5 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
IGKV2-28A0A075B6P5 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC12.02□□□□□ -0.49
IGKV2-28A0A075B6P5 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
IGKV2-28A0A075B6P5 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
IGKV2-28A0A075B6P5 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
IGKV2-28A0A075B6P5 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
IGKV2-28A0A075B6P5 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
IGKV2-28A0A075B6P5 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
IGKV2-28A0A075B6P5 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
IGKV2-28A0A075B6P5 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
IGKV2-28A0A075B6P5 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
IGKV2-28A0A075B6P5 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
IGKV2-28A0A075B6P5 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC12.02□□□□□ -0.49
IGKV2-28A0A075B6P5 UNC93B4-201ENST00000505679 747 ntBASIC12.02□□□□□ -0.49
IGKV2-28A0A075B6P5 RGMA-211ENST00000557420 989 ntTSL 3 BASIC12.02□□□□□ -0.49
IGKV2-28A0A075B6P5 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
IGKV2-28A0A075B6P5 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC12.02□□□□□ -0.49
IGKV2-28A0A075B6P5 AC004264.1-201ENST00000608354 794 ntBASIC12.02□□□□□ -0.49
IGKV2-28A0A075B6P5 GAMT-205ENST00000640762 751 ntTSL 5 BASIC12.02□□□□□ -0.49
IGKV2-28A0A075B6P5 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
IGKV2-28A0A075B6P5 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
IGKV2-28A0A075B6P5 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
IGKV2-28A0A075B6P5 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
IGKV2-28A0A075B6P5 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
IGKV2-28A0A075B6P5 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
IGKV2-28A0A075B6P5 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
IGKV2-28A0A075B6P5 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
IGKV2-28A0A075B6P5 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
IGKV2-28A0A075B6P5 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC12.02□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms