Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.77■□□□□ 0.44
CSNK1G3Q9Y6M4 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.77■□□□□ 0.44
CSNK1G3Q9Y6M4 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CSNK1G3Q9Y6M4 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.77■□□□□ 0.44
CSNK1G3Q9Y6M4 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CSNK1G3Q9Y6M4 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CSNK1G3Q9Y6M4 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.77■□□□□ 0.44
CSNK1G3Q9Y6M4 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CSNK1G3Q9Y6M4 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CSNK1G3Q9Y6M4 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CSNK1G3Q9Y6M4 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.77■□□□□ 0.44
CSNK1G3Q9Y6M4 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CSNK1G3Q9Y6M4 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.77■□□□□ 0.44
CSNK1G3Q9Y6M4 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.77■□□□□ 0.44
CSNK1G3Q9Y6M4 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CSNK1G3Q9Y6M4 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CSNK1G3Q9Y6M4 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CSNK1G3Q9Y6M4 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.77■□□□□ 0.44
CSNK1G3Q9Y6M4 MIR5100-201ENST00000579544 119 ntBASIC17.77■□□□□ 0.44
CSNK1G3Q9Y6M4 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.77■□□□□ 0.44
CSNK1G3Q9Y6M4 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CSNK1G3Q9Y6M4 AL591684.3-201ENST00000605187 298 ntBASIC17.77■□□□□ 0.44
CSNK1G3Q9Y6M4 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.77■□□□□ 0.44
CSNK1G3Q9Y6M4 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CSNK1G3Q9Y6M4 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
CSNK1G3Q9Y6M4 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.77■□□□□ 0.44
CSNK1G3Q9Y6M4 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.77■□□□□ 0.44
CSNK1G3Q9Y6M4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CSNK1G3Q9Y6M4 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CSNK1G3Q9Y6M4 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
CSNK1G3Q9Y6M4 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CSNK1G3Q9Y6M4 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CSNK1G3Q9Y6M4 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
CSNK1G3Q9Y6M4 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CSNK1G3Q9Y6M4 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CSNK1G3Q9Y6M4 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CSNK1G3Q9Y6M4 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CSNK1G3Q9Y6M4 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CSNK1G3Q9Y6M4 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CSNK1G3Q9Y6M4 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CSNK1G3Q9Y6M4 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CSNK1G3Q9Y6M4 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.76■□□□□ 0.43
CSNK1G3Q9Y6M4 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CSNK1G3Q9Y6M4 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CSNK1G3Q9Y6M4 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CSNK1G3Q9Y6M4 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CSNK1G3Q9Y6M4 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CSNK1G3Q9Y6M4 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
CSNK1G3Q9Y6M4 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.76■□□□□ 0.43
CSNK1G3Q9Y6M4 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.76■□□□□ 0.43
CSNK1G3Q9Y6M4 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.76■□□□□ 0.43
CSNK1G3Q9Y6M4 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CSNK1G3Q9Y6M4 AC114341.1-201ENST00000618070 349 ntBASIC17.76■□□□□ 0.43
CSNK1G3Q9Y6M4 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CSNK1G3Q9Y6M4 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.76■□□□□ 0.43
CSNK1G3Q9Y6M4 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CSNK1G3Q9Y6M4 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CSNK1G3Q9Y6M4 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.76■□□□□ 0.43
CSNK1G3Q9Y6M4 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.76■□□□□ 0.43
CSNK1G3Q9Y6M4 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.76■□□□□ 0.43
CSNK1G3Q9Y6M4 SDHAP2-201ENST00000455183 2001 ntBASIC17.76■□□□□ 0.43
CSNK1G3Q9Y6M4 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CSNK1G3Q9Y6M4 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CSNK1G3Q9Y6M4 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CSNK1G3Q9Y6M4 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.75■□□□□ 0.43
CSNK1G3Q9Y6M4 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.75■□□□□ 0.43
CSNK1G3Q9Y6M4 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CSNK1G3Q9Y6M4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CSNK1G3Q9Y6M4 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.75■□□□□ 0.43
CSNK1G3Q9Y6M4 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CSNK1G3Q9Y6M4 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
CSNK1G3Q9Y6M4 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.75■□□□□ 0.43
CSNK1G3Q9Y6M4 AP000347.1-202ENST00000435868 847 ntBASIC17.75■□□□□ 0.43
CSNK1G3Q9Y6M4 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.75■□□□□ 0.43
CSNK1G3Q9Y6M4 AC068472.1-201ENST00000474589 881 ntBASIC17.75■□□□□ 0.43
CSNK1G3Q9Y6M4 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.75■□□□□ 0.43
CSNK1G3Q9Y6M4 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.75■□□□□ 0.43
CSNK1G3Q9Y6M4 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.75■□□□□ 0.43
CSNK1G3Q9Y6M4 AF238378.1-201ENST00000526806 358 ntBASIC17.75■□□□□ 0.43
CSNK1G3Q9Y6M4 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.75■□□□□ 0.43
CSNK1G3Q9Y6M4 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CSNK1G3Q9Y6M4 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CSNK1G3Q9Y6M4 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CSNK1G3Q9Y6M4 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CSNK1G3Q9Y6M4 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
CSNK1G3Q9Y6M4 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CSNK1G3Q9Y6M4 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CSNK1G3Q9Y6M4 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSNK1G3Q9Y6M4 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CSNK1G3Q9Y6M4 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CSNK1G3Q9Y6M4 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.74■□□□□ 0.43
CSNK1G3Q9Y6M4 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSNK1G3Q9Y6M4 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSNK1G3Q9Y6M4 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CSNK1G3Q9Y6M4 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSNK1G3Q9Y6M4 AL024508.2-201ENST00000607749 1894 ntBASIC17.74■□□□□ 0.43
CSNK1G3Q9Y6M4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSNK1G3Q9Y6M4 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.74■□□□□ 0.43
CSNK1G3Q9Y6M4 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSNK1G3Q9Y6M4 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms