Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CYP46A1Q9Y6A2 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CYP46A1Q9Y6A2 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
CYP46A1Q9Y6A2 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CYP46A1Q9Y6A2 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC21.59■■□□□ 1.05
CYP46A1Q9Y6A2 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.59■■□□□ 1.05
CYP46A1Q9Y6A2 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.59■■□□□ 1.05
CYP46A1Q9Y6A2 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CYP46A1Q9Y6A2 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC21.59■■□□□ 1.05
CYP46A1Q9Y6A2 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
CYP46A1Q9Y6A2 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CYP46A1Q9Y6A2 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CYP46A1Q9Y6A2 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
CYP46A1Q9Y6A2 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CYP46A1Q9Y6A2 GNAS-203ENST00000306120 1878 ntBASIC21.58■■□□□ 1.05
CYP46A1Q9Y6A2 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC21.58■■□□□ 1.05
CYP46A1Q9Y6A2 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CYP46A1Q9Y6A2 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
CYP46A1Q9Y6A2 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC21.58■■□□□ 1.05
CYP46A1Q9Y6A2 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CYP46A1Q9Y6A2 AP000523.1-201ENST00000398242 1049 ntBASIC21.58■■□□□ 1.05
CYP46A1Q9Y6A2 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CYP46A1Q9Y6A2 AC087499.1-201ENST00000418141 1075 ntBASIC21.58■■□□□ 1.05
CYP46A1Q9Y6A2 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
CYP46A1Q9Y6A2 AC145285.6-201ENST00000604632 637 ntBASIC21.58■■□□□ 1.05
CYP46A1Q9Y6A2 HLA-DQB1-201ENST00000374943 1656 ntBASIC21.58■■□□□ 1.05
CYP46A1Q9Y6A2 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CYP46A1Q9Y6A2 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC21.58■■□□□ 1.05
CYP46A1Q9Y6A2 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
CYP46A1Q9Y6A2 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CYP46A1Q9Y6A2 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC21.58■■□□□ 1.04
CYP46A1Q9Y6A2 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
CYP46A1Q9Y6A2 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CYP46A1Q9Y6A2 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CYP46A1Q9Y6A2 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CYP46A1Q9Y6A2 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CYP46A1Q9Y6A2 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CYP46A1Q9Y6A2 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CYP46A1Q9Y6A2 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC21.58■■□□□ 1.04
CYP46A1Q9Y6A2 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
CYP46A1Q9Y6A2 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CYP46A1Q9Y6A2 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CYP46A1Q9Y6A2 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CYP46A1Q9Y6A2 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CYP46A1Q9Y6A2 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CYP46A1Q9Y6A2 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CYP46A1Q9Y6A2 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CYP46A1Q9Y6A2 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.57■■□□□ 1.04
CYP46A1Q9Y6A2 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CYP46A1Q9Y6A2 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CYP46A1Q9Y6A2 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CYP46A1Q9Y6A2 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC21.57■■□□□ 1.04
CYP46A1Q9Y6A2 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CYP46A1Q9Y6A2 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
CYP46A1Q9Y6A2 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.57■■□□□ 1.04
CYP46A1Q9Y6A2 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CYP46A1Q9Y6A2 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC21.57■■□□□ 1.04
CYP46A1Q9Y6A2 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CYP46A1Q9Y6A2 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CYP46A1Q9Y6A2 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CYP46A1Q9Y6A2 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
CYP46A1Q9Y6A2 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CYP46A1Q9Y6A2 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC21.57■■□□□ 1.04
CYP46A1Q9Y6A2 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
CYP46A1Q9Y6A2 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC21.56■■□□□ 1.04
CYP46A1Q9Y6A2 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
CYP46A1Q9Y6A2 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC21.56■■□□□ 1.04
CYP46A1Q9Y6A2 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC21.56■■□□□ 1.04
CYP46A1Q9Y6A2 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
CYP46A1Q9Y6A2 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CYP46A1Q9Y6A2 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CYP46A1Q9Y6A2 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CYP46A1Q9Y6A2 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
CYP46A1Q9Y6A2 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CYP46A1Q9Y6A2 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CYP46A1Q9Y6A2 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC21.56■■□□□ 1.04
CYP46A1Q9Y6A2 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC21.56■■□□□ 1.04
CYP46A1Q9Y6A2 AC141257.4-201ENST00000634557 245 ntBASIC21.56■■□□□ 1.04
CYP46A1Q9Y6A2 AC136944.6-201ENST00000634818 245 ntBASIC21.56■■□□□ 1.04
CYP46A1Q9Y6A2 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
CYP46A1Q9Y6A2 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CYP46A1Q9Y6A2 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
CYP46A1Q9Y6A2 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CYP46A1Q9Y6A2 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
CYP46A1Q9Y6A2 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CYP46A1Q9Y6A2 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
CYP46A1Q9Y6A2 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CYP46A1Q9Y6A2 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CYP46A1Q9Y6A2 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CYP46A1Q9Y6A2 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CYP46A1Q9Y6A2 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
CYP46A1Q9Y6A2 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CYP46A1Q9Y6A2 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CYP46A1Q9Y6A2 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CYP46A1Q9Y6A2 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CYP46A1Q9Y6A2 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CYP46A1Q9Y6A2 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CYP46A1Q9Y6A2 DUT-205ENST00000558813 769 ntTSL 2 BASIC21.55■■□□□ 1.04
CYP46A1Q9Y6A2 AL138966.2-201ENST00000621997 464 ntBASIC21.55■■□□□ 1.04
CYP46A1Q9Y6A2 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms